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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
96 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183660357
ORJL010016464
247224
Alphaproteobacteria
CGT
Thr
>WENV183660645
ORJL010041747
109113
Alphaproteobacteria
CAG
Leu
>WENV183660759
ORJL010050639
96897
Alphaproteobacteria
TAG
Leu
>WENV183660872
ORJL010062492
239037
Alphaproteobacteria
TTT
Lys
>WENV183660879
ORJL010062964
131431
Alphaproteobacteria
GGG
Pro
>WENV183661342
ORJL010101153
146929
Alphaproteobacteria
CCG
Arg
>WENV183661621
ORJL010122824
340956
Alphaproteobacteria
TTG
Gln
>WENV183661787
ORJL010136560
279830
Alphaproteobacteria
TAC
Val
>WENV183661799
ORJL010137428
340956
Alphaproteobacteria
TTG
Gln
>WENV183662662
ORJL010214251
164825
Alphaproteobacteria
GAT
Ile
>WENV183662675
ORJL010215438
340956
Alphaproteobacteria
TTG
Gln
>WENV183662676
ORJL010215538
146577
Alphaproteobacteria
CCA
Trp
>WENV183662760
ORJL010223471
81096
Alphaproteobacteria
GAG
Leu
>WENV183663114
ORJL010254908
237474
Alphaproteobacteria
CCA
Trp
>WENV183663372
ORJL010278160
99414
Alphaproteobacteria
GTA
Tyr
>WENV183663394
ORJL010279835
189909
Alphaproteobacteria
GAT
Ile
>WENV183663470
ORJL010287699
342876
Alphaproteobacteria
GAC
Val
>WENV183663588
ORJL010296868
66752
Alphaproteobacteria
CAG
Leu
>WENV183663746
ORJL010312603
146864
Alphaproteobacteria
TGG
Pro
>WENV183663907
ORJL010325069
59118
Alphaproteobacteria
CAG
Leu
>WENV183663968
ORJL010331302
66752
Alphaproteobacteria
CAG
Leu
>WENV183664090
ORJL010343007
359754
Alphaproteobacteria
TAC
Val
>WENV183664175
ORJL010351204
257082
Alphaproteobacteria
TAC
Val
>WENV183664513
ORJL010386138
185506
Alphaproteobacteria
CAT
Met
>WENV183664679
ORJL010398953
381718
Alphaproteobacteria
CCC
Gly
>WENV183664772
ORJL010408379
237579
Alphaproteobacteria
CTT
Lys
>WENV183665074
ORJL010438036
59118
Alphaproteobacteria
CAG
Leu
>WENV183665255
ORJL010452458
412798
Alphaproteobacteria
CTG
Gln
>WENV183665470
ORJL010465512
339465
Alphaproteobacteria
GGT
Thr
>WENV183665479
ORJL010465899
237579
Alphaproteobacteria
CTT
Lys
>WENV183665901
ORJL010503185
342876
Alphaproteobacteria
GAC
Val
>WENV183666302
ORJL010539818
155902
Alphaproteobacteria
GTG
His
>WENV183666593
ORJL010566512
95923
Alphaproteobacteria
TAG
Leu
>WENV183666985
ORJL010602368
101826
Alphaproteobacteria
TAG
Leu
>WENV183667242
ORJL010628714
81096
Alphaproteobacteria
GAG
Leu
>WENV183667316
ORJL010636109
26652
Alphaproteobacteria
GGA
Ser
>WENV183667395
ORJL010644449
146578
Alphaproteobacteria
CGG
Pro
>WENV183667419
ORJL010646272
116527
Alphaproteobacteria
CAA
Leu
>WENV183668083
ORJL010710072
338524
Alphaproteobacteria
CAC
Val
>WENV183668394
ORJL010736609
95924
Alphaproteobacteria
GAG
Leu
>WENV183668666
ORJL010763541
149985
Alphaproteobacteria
ACG
Arg
>WENV183668704
ORJL010765926
377950
Alphaproteobacteria
CAC
Val
>WENV183668866
ORJL010781364
279830
Alphaproteobacteria
TAC
Val
>WENV183669009
ORJL010797358
30071
Alphaproteobacteria
CGA
Ser
>WENV183669028
ORJL010800128
279830
Alphaproteobacteria
TAC
Val
>WENV183669250
ORJL010822064
152034
Alphaproteobacteria
GTC
Asp
>WENV183669595
ORJL010858467
159426
Alphaproteobacteria
CAT
Met
>WENV183670105
ORJL010908578
259072
Alphaproteobacteria
CGC
Ala
>WENV183670126
ORJL010911062
352191
Alphaproteobacteria
GGT
Thr
>WENV183670133
ORJL010911520
66752
Alphaproteobacteria
CAG
Leu
>WENV183670253
ORJL010926803
255832
Alphaproteobacteria
CGC
Ala
>WENV183670882
ORJL010998869
377950
Alphaproteobacteria
CAC
Val
>WENV183670886
ORJL010999209
239160
Alphaproteobacteria
CGT
Thr
>WENV183671046
ORJL011021062
199776
Alphaproteobacteria
CGG
Pro
>WENV183671559
ORJL011074885
96188
Alphaproteobacteria
CAG
Leu
>WENV183672009
ORJL011125222
339464
Alphaproteobacteria
GCC
Gly
>WENV183672087
ORJL011134730
352191
Alphaproteobacteria
GGT
Thr
>WENV183672112
ORJL011136509
435239
Alphaproteobacteria
CTG
Gln
>WENV183672113
ORJL011136509
435239
Alphaproteobacteria
CTG
Gln
>WENV183672151
ORJL011140866
338524
Alphaproteobacteria
CAC
Val
>WENV183672654
ORJL011195680
175748
Alphaproteobacteria
CAT
Met
>WENV183672970
ORJL011229070
185506
Alphaproteobacteria
CAT
Met
>WENV183672971
ORJL011229109
185506
Alphaproteobacteria
CAT
Met
>WENV183672982
ORJL011229937
81096
Alphaproteobacteria
GAG
Leu
>WENV183672998
ORJL011232312
289655
Alphaproteobacteria
GGC
Ala
>WENV183673399
ORJL011272838
318048
Alphaproteobacteria
CCA
Trp
>WENV183673570
ORJL011292982
23611
Alphaproteobacteria
CGA
Ser
>WENV183673821
ORJL011321505
202510
Alphaproteobacteria
TGG
Pro
>WENV183673979
ORJL011336382
249928
Alphaproteobacteria
TAC
Val
>WENV183674249
ORJL011366539
96188
Alphaproteobacteria
CAG
Leu
>WENV183674330
ORJL011374967
293056
Alphaproteobacteria
TGC
Ala
>WENV183674418
ORJL011386720
164825
Alphaproteobacteria
GAT
Ile
>WENV183674455
ORJL011391172
381718
Alphaproteobacteria
CCC
Gly
>WENV183674744
ORJL011426956
4669
Alphaproteobacteria
GCT
Ser
>WENV183674881
ORJL011442817
259072
Alphaproteobacteria
CGC
Ala
>WENV183675227
ORJL011486452
279830
Alphaproteobacteria
TAC
Val
>WENV183675375
ORJL011502336
155663
Alphaproteobacteria
CCG
Arg
>WENV183675632
ORJL011532032
247224
Alphaproteobacteria
CGT
Thr
>WENV183675943
ORJL011571365
152034
Alphaproteobacteria
GTC
Asp
>WENV183676310
ORJL011608540
148429
Alphaproteobacteria
CCT
Arg
>WENV183676340
ORJL011611995
7609
Alphaproteobacteria
GCT
Ser
>WENV183676724
ORJL011660835
377950
Alphaproteobacteria
CAC
Val
>WENV183676728
ORJL011661947
377950
Alphaproteobacteria
CAC
Val
>WENV183676979
ORJL011694879
339289
Alphaproteobacteria
CAT
Met
>WENV183677117
ORJL011712773
30071
Alphaproteobacteria
CGA
Ser
>WENV183677145
ORJL011715388
339149
Alphaproteobacteria
GTT
Asn
>WENV183677146
ORJL011715388
412154
Alphaproteobacteria
GCA
Cys
>WENV183677313
ORJL011739335
381781
Alphaproteobacteria
CAC
Val
>WENV183677573
ORJL011772992
175748
Alphaproteobacteria
CAT
Met
>WENV183677576
ORJL011773387
175748
Alphaproteobacteria
CAT
Met
>WENV183677833
ORJL011803332
199776
Alphaproteobacteria
CGG
Pro
>WENV183677966
ORJL011818280
81096
Alphaproteobacteria
GAG
Leu
>WENV183678083
ORJL011836453
146578
Alphaproteobacteria
CGG
Pro
>WENV183678692
ORJL011912095
338524
Alphaproteobacteria
CAC
Val
>WENV183678796
ORJL011924165
237579
Alphaproteobacteria
CTT
Lys
>WENV183678949
ORJL011942992
251610
Alphaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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