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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
263 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183581543
OOCP01000002
338147
Bacillota
CTC
Glu
>WENV183581585
OOCP01000017
235134
Bacillota
GAA
Phe
>WENV183581586
OOCP01000017
240017
Bacillota
GCC
Gly
>WENV183581583
OOCP01000017
263765
Bacillota
TAC
Val
>WENV183581605
OOCP01000023
271471
Bacillota
GCC
Gly
>WENV183581602
OOCP01000023
263765
Bacillota
TAC
Val
>WENV183581641
OOCP01000045
338147
Bacillota
CTC
Glu
>WENV183581640
OOCP01000045
338147
Bacillota
CTC
Glu
>WENV183581639
OOCP01000045
338147
Bacillota
CTC
Glu
>WENV183581656
OOCP01000060
235134
Bacillota
GAA
Phe
>WENV183581657
OOCP01000060
240017
Bacillota
GCC
Gly
>WENV183581654
OOCP01000060
263765
Bacillota
TAC
Val
>WENV183581672
OOCP01000072
243098
Bacillota
GGT
Thr
>WENV183581708
OOCP01000106
344240
Bacillota
GCC
Gly
>WENV183581707
OOCP01000106
196632
Bacillota
GTC
Asp
>WENV183581720
OOCP01000118
313454
Bacillota
GAA
Phe
>WENV183581726
OOCP01000120
37071
Bacillota
TGA
Ser
>WENV183581723
OOCP01000120
235113
Bacillota
GAA
Phe
>WENV183581752
OOCP01000147
144612
Bacillota
TCT
Arg
>WENV183581750
OOCP01000147
144612
Bacillota
TCT
Arg
>WENV183581764
OOCP01000171
411549
Bacillota
TTG
Gln
>WENV183581783
OOCP01000190
59312
Bacillota
CAG
Leu
>WENV183581787
OOCP01000197
267649
Bacillota
TAC
Val
>WENV183581822
OOCP01000246
95563
Bacillota
GTA
Tyr
>WENV183581835
OOCP01000261
235142
Bacillota
CTT
Lys
>WENV183581837
OOCP01000262
144610
Bacillota
GTG
His
>WENV183581847
OOCP01000271
263765
Bacillota
TAC
Val
>WENV183581857
OOCP01000293
100326
Bacillota
GTA
Tyr
>WENV183581858
OOCP01000295
58712
Bacillota
CAG
Leu
>WENV183581864
OOCP01000300
274189
Bacillota
TGT
Thr
>WENV183581867
OOCP01000303
235095
Bacillota
GGT
Thr
>WENV183581902
OOCP01000344
338129
Bacillota
TGT
Thr
>WENV183581915
OOCP01000374
338147
Bacillota
CTC
Glu
>WENV183581930
OOCP01000391
293599
Bacillota
CTT
Lys
>WENV183581950
OOCP01000419
338127
Bacillota
TTG
Gln
>WENV183581972
OOCP01000442
59312
Bacillota
CAG
Leu
>WENV183581971
OOCP01000442
44859
Bacillota
AAG
Leu
>WENV183581970
OOCP01000442
44859
Bacillota
AAG
Leu
>WENV183581982
OOCP01000462
429429
Bacillota
CCA
Trp
>WENV183582003
OOCP01000507
154063
Bacillota
CGG
Pro
>WENV183582025
OOCP01000547
245296
Bacillota
CCC
Gly
>WENV183582040
OOCP01000562
235098
Bacillota
GAC
Val
>WENV183582039
OOCP01000562
235098
Bacillota
GAC
Val
>WENV183582049
OOCP01000582
235154
Bacillota
GTT
Asn
>WENV183582051
OOCP01000582
429443
Bacillota
GCA
Cys
>WENV183582054
OOCP01000590
235124
Bacillota
TGG
Pro
>WENV183582056
OOCP01000600
11034
Bacillota
GGA
Ser
>WENV183582060
OOCP01000614
411547
Bacillota
CTG
Gln
>WENV183582062
OOCP01000623
169968
Bacillota
CAT
Met
>WENV183582067
OOCP01000624
148239
Bacillota
TCT
Arg
>WENV183582068
OOCP01000624
156937
Bacillota
GTG
His
>WENV183582081
OOCP01000647
338149
Bacillota
CTC
Glu
>WENV183582079
OOCP01000647
338149
Bacillota
CTC
Glu
>WENV183582082
OOCP01000647
144621
Bacillota
GTT
Asn
>WENV183582080
OOCP01000647
144621
Bacillota
GTT
Asn
>WENV183582094
OOCP01000684
429429
Bacillota
CCA
Trp
>WENV183582099
OOCP01000703
340263
Bacillota
TTC
Glu
>WENV183582101
OOCP01000703
148348
Bacillota
GTC
Asp
>WENV183582102
OOCP01000703
239076
Bacillota
GAA
Phe
>WENV183582100
OOCP01000703
239079
Bacillota
TAC
Val
>WENV183582098
OOCP01000703
239078
Bacillota
TTT
Lys
>WENV183582112
OOCP01000716
162445
Bacillota
CAT
Met
>WENV183582110
OOCP01000716
235142
Bacillota
CTT
Lys
>WENV183582122
OOCP01000739
235098
Bacillota
GAC
Val
>WENV183582131
OOCP01000749
304022
Bacillota
GCC
Gly
>WENV183582140
OOCP01000766
245298
Bacillota
CGG
Pro
>WENV183582139
OOCP01000766
411547
Bacillota
CTG
Gln
>WENV183582141
OOCP01000766
411549
Bacillota
TTG
Gln
>WENV183582148
OOCP01000804
296878
Bacillota
GTT
Asn
>WENV183582166
OOCP01000841
338152
Bacillota
TTC
Glu
>WENV183582165
OOCP01000841
235154
Bacillota
GTT
Asn
>WENV183582175
OOCP01000843
304022
Bacillota
GCC
Gly
>WENV183582186
OOCP01000891
309417
Bacillota
GGC
Ala
>WENV183582191
OOCP01000900
419639
Bacillota
GCA
Cys
>WENV183582190
OOCP01000900
344240
Bacillota
GCC
Gly
>WENV183582188
OOCP01000900
196632
Bacillota
GTC
Asp
>WENV183582189
OOCP01000900
245344
Bacillota
GAA
Phe
>WENV183582198
OOCP01000922
37269
Bacillota
TGA
Ser
>WENV183582203
OOCP01000931
44854
Bacillota
TGA
Ser
>WENV183582204
OOCP01000931
4624
Bacillota
GCT
Ser
>WENV183582207
OOCP01000935
298620
Bacillota
CAT
Met
>WENV183582222
OOCP01001009
238910
Bacillota
CTT
Lys
>WENV183582225
OOCP01001009
245386
Bacillota
CCA
Trp
>WENV183582226
OOCP01001013
144583
Bacillota
ACG
Arg
>WENV183582248
OOCP01001069
235098
Bacillota
GAC
Val
>WENV183582253
OOCP01001080
338128
Bacillota
TTC
Glu
>WENV183582285
OOCP01001198
340265
Bacillota
GCC
Gly
>WENV183582287
OOCP01001201
235124
Bacillota
TGG
Pro
>WENV183582290
OOCP01001203
302150
Bacillota
TAC
Val
>WENV183582288
OOCP01001203
238974
Bacillota
GAA
Phe
>WENV183582313
OOCP01001301
313454
Bacillota
GAA
Phe
>WENV183582322
OOCP01001340
194150
Bacillota
TGG
Pro
>WENV183582336
OOCP01001399
144610
Bacillota
GTG
His
>WENV183582339
OOCP01001399
114075
Bacillota
TAG
Leu
>WENV183582346
OOCP01001415
245296
Bacillota
CCC
Gly
>WENV183582371
OOCP01001483
245298
Bacillota
CGG
Pro
>WENV183582375
OOCP01001503
235114
Bacillota
TTT
Lys
>WENV183582373
OOCP01001503
144610
Bacillota
GTG
His
>WENV183582396
OOCP01001651
11034
Bacillota
GGA
Ser
>WENV183582401
OOCP01001683
338129
Bacillota
TGT
Thr
>WENV183582402
OOCP01001688
245344
Bacillota
GAA
Phe
>WENV183582412
OOCP01001752
256380
Bacillota
>WENV183582420
OOCP01001822
148188
Bacillota
CCG
Arg
>WENV183582426
OOCP01001852
235124
Bacillota
TGG
Pro
>WENV183582427
OOCP01001858
302150
Bacillota
TAC
Val
>WENV183582452
OOCP01001982
344240
Bacillota
GCC
Gly
>WENV183582456
OOCP01001992
340265
Bacillota
GCC
Gly
>WENV183582455
OOCP01001992
340265
Bacillota
GCC
Gly
>WENV183582458
OOCP01001995
309417
Bacillota
GGC
Ala
>WENV183582464
OOCP01002005
147684
Bacillota
ACG
Arg
>WENV183582476
OOCP01002054
235127
Bacillota
TTT
Lys
>WENV183582500
OOCP01002208
411547
Bacillota
CTG
Gln
>WENV183582537
OOCP01002538
411547
Bacillota
CTG
Gln
>WENV183582539
OOCP01002551
411549
Bacillota
TTG
Gln
>WENV183582542
OOCP01002580
411547
Bacillota
CTG
Gln
>WENV183582544
OOCP01002582
256380
Bacillota
>WENV183582558
OOCP01002663
235095
Bacillota
GGT
Thr
>WENV183582564
OOCP01002710
235098
Bacillota
GAC
Val
>WENV183582568
OOCP01002729
239080
Bacillota
CTG
Gln
>WENV183582573
OOCP01002779
144594
Bacillota
CAC
Val
>WENV183582584
OOCP01002863
340802
Bacillota
TTG
Gln
>WENV183582585
OOCP01002863
313164
Bacillota
TTT
Lys
>WENV183582590
OOCP01002904
100326
Bacillota
GTA
Tyr
>WENV183582599
OOCP01003049
429429
Bacillota
CCA
Trp
>WENV183582601
OOCP01003088
235095
Bacillota
GGT
Thr
>WENV183582605
OOCP01003100
235124
Bacillota
TGG
Pro
>WENV183582612
OOCP01003129
37269
Bacillota
TGA
Ser
>WENV183582614
OOCP01003132
304759
Bacillota
TAC
Val
>WENV183582618
OOCP01003144
411549
Bacillota
TTG
Gln
>WENV183582619
OOCP01003150
144621
Bacillota
GTT
Asn
>WENV183582623
OOCP01003166
11034
Bacillota
GGA
Ser
>WENV183582634
OOCP01003273
235098
Bacillota
GAC
Val
>WENV183582668
OOCP01003561
338128
Bacillota
TTC
Glu
>WENV183582681
OOCP01003707
144594
Bacillota
CAC
Val
>WENV183582687
OOCP01003786
304759
Bacillota
TAC
Val
>WENV183582693
OOCP01003843
338129
Bacillota
TGT
Thr
>WENV183582700
OOCP01003882
148188
Bacillota
CCG
Arg
>WENV183582701
OOCP01003928
256380
Bacillota
>WENV183582734
OOCP01004325
338149
Bacillota
CTC
Glu
>WENV183582735
OOCP01004325
144621
Bacillota
GTT
Asn
>WENV183582744
OOCP01004418
267649
Bacillota
TAC
Val
>WENV183582758
OOCP01004513
155089
Bacillota
CAT
Met
>WENV183582761
OOCP01004566
235079
Bacillota
GAA
Phe
>WENV183582764
OOCP01004579
148188
Bacillota
CCG
Arg
>WENV183582767
OOCP01004596
411547
Bacillota
CTG
Gln
>WENV183582777
OOCP01004703
235095
Bacillota
GGT
Thr
>WENV183582781
OOCP01004794
414486
Bacillota
CCC
Gly
>WENV183582790
OOCP01004987
147684
Bacillota
ACG
Arg
>WENV183582804
OOCP01005171
304022
Bacillota
GCC
Gly
>WENV183582815
OOCP01005306
148188
Bacillota
CCG
Arg
>WENV183582829
OOCP01005390
338128
Bacillota
TTC
Glu
>WENV183582834
OOCP01005419
114002
Bacillota
CAA
Leu
>WENV183582843
OOCP01005460
152492
Bacillota
GGG
Pro
>WENV183582860
OOCP01005616
41154
Bacillota
TAA
Leu
>WENV183582862
OOCP01005657
304022
Bacillota
GCC
Gly
>WENV183582868
OOCP01005667
313164
Bacillota
TTT
Lys
>WENV183582865
OOCP01005667
147674
Bacillota
TCT
Arg
>WENV183582863
OOCP01005667
238974
Bacillota
GAA
Phe
>WENV183582875
OOCP01005675
235127
Bacillota
TTT
Lys
>WENV183582872
OOCP01005675
147674
Bacillota
TCT
Arg
>WENV183582899
OOCP01006109
411547
Bacillota
CTG
Gln
>WENV183582913
OOCP01006355
144612
Bacillota
TCT
Arg
>WENV183582920
OOCP01006478
338152
Bacillota
TTC
Glu
>WENV183582919
OOCP01006478
287000
Bacillota
GTT
Asn
>WENV183582928
OOCP01006597
277200
Bacillota
GGC
Ala
>WENV183582948
OOCP01006988
235098
Bacillota
GAC
Val
>WENV183582952
OOCP01007077
249522
Bacillota
TAC
Val
>WENV183582960
OOCP01007172
243647
Bacillota
TTT
Lys
>WENV183582961
OOCP01007172
391536
Bacillota
TTC
Glu
>WENV183582962
OOCP01007172
243612
Bacillota
TAC
Val
>WENV183582959
OOCP01007172
287034
Bacillota
GTT
Asn
>WENV183582966
OOCP01007231
263765
Bacillota
TAC
Val
>WENV183582970
OOCP01007349
245296
Bacillota
CCC
Gly
>WENV183583000
OOCP01007985
235095
Bacillota
GGT
Thr
>WENV183583003
OOCP01008089
413152
Bacillota
TCC
Gly
>WENV183583019
OOCP01008331
144610
Bacillota
GTG
His
>WENV183583018
OOCP01008331
157635
Bacillota
TCT
Arg
>WENV183583031
OOCP01008526
243647
Bacillota
TTT
Lys
>WENV183583029
OOCP01008526
243613
Bacillota
GTG
His
>WENV183583030
OOCP01008526
343027
Bacillota
TTG
Gln
>WENV183583033
OOCP01008689
338129
Bacillota
TGT
Thr
>WENV183583040
OOCP01008804
24650
Bacillota
TAA
Leu
>WENV183583036
OOCP01008804
152151
Bacillota
TCT
Arg
>WENV183583060
OOCP01009535
412387
Bacillota
GCA
Cys
>WENV183583063
OOCP01009966
304022
Bacillota
GCC
Gly
>WENV183583071
OOCP01010194
429429
Bacillota
CCA
Trp
>WENV183583083
OOCP01010483
316443
Bacillota
GTC
Asp
>WENV183583085
OOCP01010483
109476
Bacillota
TAG
Leu
>WENV183583109
OOCP01010722
16842
Bacillota
CGA
Ser
>WENV183583112
OOCP01010827
313454
Bacillota
GAA
Phe
>WENV183583117
OOCP01010983
196621
Bacillota
GTC
Asp
>WENV183583118
OOCP01010983
235095
Bacillota
GGT
Thr
>WENV183583116
OOCP01010983
235171
Bacillota
CCA
Trp
>WENV183583120
OOCP01011009
341763
Bacillota
CTC
Glu
>WENV183583124
OOCP01011124
272992
Bacillota
CTT
Lys
>WENV183583128
OOCP01011358
313454
Bacillota
GAA
Phe
>WENV183583151
OOCP01012475
340802
Bacillota
TTG
Gln
>WENV183583150
OOCP01012475
144610
Bacillota
GTG
His
>WENV183583155
OOCP01012522
173314
Bacillota
GAT
Ile
>WENV183583159
OOCP01012652
154063
Bacillota
CGG
Pro
>WENV183583162
OOCP01012736
307003
Bacillota
TGC
Ala
>WENV183583165
OOCP01012770
153911
Bacillota
GAT
Ile
>WENV183583171
OOCP01012950
245386
Bacillota
CCA
Trp
>WENV183583176
OOCP01013216
152492
Bacillota
GGG
Pro
>WENV183583177
OOCP01013256
241441
Bacillota
GCC
Gly
>WENV183583198
OOCP01014019
100326
Bacillota
GTA
Tyr
>WENV183583200
OOCP01014106
247734
Bacillota
TGC
Ala
>WENV183583214
OOCP01014781
263765
Bacillota
TAC
Val
>WENV183583216
OOCP01014913
37269
Bacillota
TGA
Ser
>WENV183583222
OOCP01015025
147135
Bacillota
ACG
Arg
>WENV183583265
OOCP01016773
235294
Bacillota
TGC
Ala
>WENV183583266
OOCP01016908
313454
Bacillota
GAA
Phe
>WENV183583273
OOCP01017270
304022
Bacillota
GCC
Gly
>WENV183583286
OOCP01017922
429429
Bacillota
CCA
Trp
>WENV183583288
OOCP01018110
238910
Bacillota
CTT
Lys
>WENV183583320
OOCP01019710
235197
Bacillota
GTC
Asp
>WENV183583322
OOCP01019710
368876
Bacillota
GCC
Gly
>WENV183583330
OOCP01020385
411547
Bacillota
CTG
Gln
>WENV183583344
OOCP01021325
149041
Bacillota
GTC
Asp
>WENV183583363
OOCP01022402
412387
Bacillota
GCA
Cys
>WENV183583364
OOCP01022412
154063
Bacillota
CGG
Pro
>WENV183583367
OOCP01022639
37213
Bacillota
TGA
Ser
>WENV183583372
OOCP01023099
338149
Bacillota
CTC
Glu
>WENV183583374
OOCP01023185
313454
Bacillota
GAA
Phe
>WENV183583380
OOCP01023382
16834
Bacillota
GCT
Ser
>WENV183583385
OOCP01024326
235127
Bacillota
TTT
Lys
>WENV183583391
OOCP01024480
152491
Bacillota
CAT
Met
>WENV183583390
OOCP01024480
281472
Bacillota
GGT
Thr
>WENV183583392
OOCP01024544
152492
Bacillota
GGG
Pro
>WENV183583398
OOCP01024891
235150
Bacillota
TGC
Ala
>WENV183583412
OOCP01026420
198135
Bacillota
GAT
Ile
>WENV183583414
OOCP01026633
235137
Bacillota
TGC
Ala
>WENV183583419
OOCP01026700
313454
Bacillota
GAA
Phe
>WENV183583430
OOCP01027140
235150
Bacillota
TGC
Ala
>WENV183583444
OOCP01029031
246023
Bacillota
TGC
Ala
>WENV183583443
OOCP01029031
201704
Bacillota
GAT
Ile
>WENV183583457
OOCP01030755
338131
Bacillota
GCC
Gly
>WENV183583485
OOCP01035971
413657
Bacillota
CCC
Gly
>WENV183583491
OOCP01037750
271471
Bacillota
GCC
Gly
>WENV183583500
OOCP01039918
267649
Bacillota
TAC
Val
>WENV183583503
OOCP01040449
238211
Bacillota
TGT
Thr
>WENV183583502
OOCP01040449
240190
Bacillota
TTT
Lys
>WENV183583506
OOCP01041418
144621
Bacillota
GTT
Asn
>WENV183583508
OOCP01041896
304022
Bacillota
GCC
Gly
>WENV183583510
OOCP01042543
368876
Bacillota
GCC
Gly
>WENV183583519
OOCP01043971
429443
Bacillota
GCA
Cys
>WENV183583524
OOCP01045368
155273
Bacillota
CAT
Met
>WENV183583534
OOCP01047181
429429
Bacillota
CCA
Trp
>WENV183583547
OOCP01049953
256380
Bacillota
>WENV183583553
OOCP01052130
127105
Bacillota
GTG
His
>WENV183583556
OOCP01052390
152492
Bacillota
GGG
Pro
>WENV183583559
OOCP01052670
119513
Bacillota
CAA
Leu
>WENV183583568
OOCP01055145
80612
Bacillota
GTA
Tyr
>WENV183583572
OOCP01056265
238489
Bacillota
GTC
Asp
>WENV183583577
OOCP01056265
390525
Bacillota
TTC
Glu
>WENV183583570
OOCP01056265
390525
Bacillota
TTC
Glu
>WENV183583573
OOCP01056265
237956
Bacillota
GAA
Phe
>WENV183583576
OOCP01056265
16595
Bacillota
GCT
Ser
>WENV183583582
OOCP01057524
237846
Bacillota
GCC
Gly
>WENV183583583
OOCP01057587
313331
Bacillota
CTC
Glu
>WENV183583605
OOCP01066315
21693
Bacillota
GCT
Ser
>WENV183583623
OOCP01070688
338152
Bacillota
TTC
Glu
>WENV183583624
OOCP01070688
241432
Bacillota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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