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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
177 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180124008
OASX01001076
24650
Bacillota
TAA
Leu
>WENV180124364
OASX01009539
243647
Bacillota
TTT
Lys
>WENV180124377
OASX01009840
361659
Bacillota
GCC
Gly
>WENV180124176
OASX01002862
16842
Bacillota
CGA
Ser
>WENV180124225
OASX01004074
339904
Bacillota
GCC
Gly
>WENV180124122
OASX01002234
37213
Bacillota
TGA
Ser
>WENV180124146
OASX01002492
37213
Bacillota
TGA
Ser
>WENV180123792
OASX01000241
144612
Bacillota
TCT
Arg
>WENV180124356
OASX01009239
340021
Bacillota
CTC
Glu
>WENV180124383
OASX01009967
154063
Bacillota
CGG
Pro
>WENV180123780
OASX01000235
267649
Bacillota
TAC
Val
>WENV180123707
OASX01000143
267649
Bacillota
TAC
Val
>WENV180123705
OASX01000143
267649
Bacillota
TAC
Val
>WENV180123693
OASX01000130
267649
Bacillota
TAC
Val
>WENV180123673
OASX01000113
267649
Bacillota
TAC
Val
>WENV180123633
OASX01000082
267649
Bacillota
TAC
Val
>WENV180124433
OASX01013136
235287
Bacillota
TTT
Lys
>WENV180124537
OASX01024527
267556
Bacillota
TAC
Val
>WENV180124129
OASX01002302
267556
Bacillota
TAC
Val
>WENV180124080
OASX01001780
267556
Bacillota
TAC
Val
>WENV180123904
OASX01000508
235098
Bacillota
GAC
Val
>WENV180123867
OASX01000401
235098
Bacillota
GAC
Val
>WENV180124031
OASX01001313
338152
Bacillota
TTC
Glu
>WENV180124428
OASX01012795
338544
Bacillota
TGT
Thr
>WENV180123926
OASX01000568
44854
Bacillota
TGA
Ser
>WENV180124530
OASX01023121
356488
Bacillota
TGT
Thr
>WENV180124203
OASX01003603
235154
Bacillota
GTT
Asn
>WENV180123961
OASX01000762
235154
Bacillota
GTT
Asn
>WENV180124352
OASX01008960
246023
Bacillota
TGC
Ala
>WENV180124164
OASX01002716
59312
Bacillota
CAG
Leu
>WENV180124645
OASX01062158
97943
Bacillota
GTA
Tyr
>WENV180124581
OASX01034014
97943
Bacillota
GTA
Tyr
>WENV180124408
OASX01011851
114359
Bacillota
TAG
Leu
>WENV180124376
OASX01009840
114359
Bacillota
TAG
Leu
>WENV180124513
OASX01021383
235137
Bacillota
TGC
Ala
>WENV180124490
OASX01018515
235137
Bacillota
TGC
Ala
>WENV180124572
OASX01032063
235294
Bacillota
TGC
Ala
>WENV180124639
OASX01061954
338208
Bacillota
>WENV180124631
OASX01053175
340802
Bacillota
TTG
Gln
>WENV180123895
OASX01000491
340802
Bacillota
TTG
Gln
>WENV180124510
OASX01020716
235903
Bacillota
TTT
Lys
>WENV180124334
OASX01007648
338143
Bacillota
CTC
Glu
>WENV180124263
OASX01004800
338143
Bacillota
CTC
Glu
>WENV180123733
OASX01000171
338143
Bacillota
CTC
Glu
>WENV180124239
OASX01004419
23437
Bacillota
GGA
Ser
>WENV180124011
OASX01001090
361897
Bacillota
CTC
Glu
>WENV180124010
OASX01001090
361897
Bacillota
CTC
Glu
>WENV180124009
OASX01001090
361897
Bacillota
CTC
Glu
>WENV180124443
OASX01013481
341763
Bacillota
CTC
Glu
>WENV180124006
OASX01001076
144668
Bacillota
GTC
Asp
>WENV180123692
OASX01000130
144668
Bacillota
GTC
Asp
>WENV180124611
OASX01042118
182792
Bacillota
GTC
Asp
>WENV180123953
OASX01000695
182792
Bacillota
GTC
Asp
>WENV180123801
OASX01000252
182792
Bacillota
GTC
Asp
>WENV180124483
OASX01017390
186380
Bacillota
GTC
Asp
>WENV180124480
OASX01017390
186380
Bacillota
GTC
Asp
>WENV180124427
OASX01012795
186380
Bacillota
GTC
Asp
>WENV180123804
OASX01000252
11034
Bacillota
GGA
Ser
>WENV180123800
OASX01000252
235117
Bacillota
TAC
Val
>WENV180124666
OASX01062912
247057
Bacillota
TGC
Ala
>WENV180124465
OASX01015464
156937
Bacillota
GTG
His
>WENV180124637
OASX01061947
235290
Bacillota
TTG
Gln
>WENV180124517
OASX01021700
114002
Bacillota
CAA
Leu
>WENV180124048
OASX01001427
338550
Bacillota
>WENV180124550
OASX01025748
274189
Bacillota
TGT
Thr
>WENV180123802
OASX01000252
235079
Bacillota
GAA
Phe
>WENV180123786
OASX01000240
235079
Bacillota
GAA
Phe
>WENV180124431
OASX01013136
144763
Bacillota
TGG
Pro
>WENV180124168
OASX01002811
81636
Bacillota
>WENV180124626
OASX01047923
243612
Bacillota
TAC
Val
>WENV180124446
OASX01014321
149041
Bacillota
GTC
Asp
>WENV180123991
OASX01000968
338149
Bacillota
CTC
Glu
>WENV180124415
OASX01011851
144766
Bacillota
CAT
Met
>WENV180123865
OASX01000398
245298
Bacillota
CGG
Pro
>WENV180124533
OASX01023210
37269
Bacillota
TGA
Ser
>WENV180124178
OASX01002876
37269
Bacillota
TGA
Ser
>WENV180123741
OASX01000185
37269
Bacillota
TGA
Ser
>WENV180124514
OASX01021587
413152
Bacillota
TCC
Gly
>WENV180124434
OASX01013136
411585
Bacillota
GCA
Cys
>WENV180124278
OASX01005260
147135
Bacillota
ACG
Arg
>WENV180124509
OASX01020716
338548
Bacillota
TTG
Gln
>WENV180124115
OASX01002165
338555
Bacillota
CCT
Arg
>WENV180123864
OASX01000398
411547
Bacillota
CTG
Gln
>WENV180123845
OASX01000337
411547
Bacillota
CTG
Gln
>WENV180124453
OASX01014469
243345
Bacillota
GAA
Phe
>WENV180123927
OASX01000568
4624
Bacillota
GCT
Ser
>WENV180124582
OASX01034014
263765
Bacillota
TAC
Val
>WENV180124482
OASX01017390
263765
Bacillota
TAC
Val
>WENV180124479
OASX01017390
263765
Bacillota
TAC
Val
>WENV180123958
OASX01000717
412387
Bacillota
GCA
Cys
>WENV180124534
OASX01023437
411584
Bacillota
TCC
Gly
>WENV180124227
OASX01004074
147692
Bacillota
TCG
Arg
>WENV180124022
OASX01001188
18852
Bacillota
GCT
Ser
>WENV180123938
OASX01000636
18852
Bacillota
GCT
Ser
>WENV180123612
OASX01000059
18852
Bacillota
GCT
Ser
>WENV180124430
OASX01013050
235095
Bacillota
GGT
Thr
>WENV180123954
OASX01000695
235095
Bacillota
GGT
Thr
>WENV180124390
OASX01010315
367412
Bacillota
GTT
Asn
>WENV180124448
OASX01014321
239832
Bacillota
TGT
Thr
>WENV180124372
OASX01009840
150597
Bacillota
TCT
Arg
>WENV180124247
OASX01004552
150597
Bacillota
TCT
Arg
>WENV180124380
OASX01009913
250349
Bacillota
GAA
Phe
>WENV180124529
OASX01023121
235289
Bacillota
GTT
Asn
>WENV180123863
OASX01000398
411549
Bacillota
TTG
Gln
>WENV180124084
OASX01001805
59296
Bacillota
AAG
Leu
>WENV180124432
OASX01013136
144767
Bacillota
GTG
His
>WENV180124068
OASX01001636
238413
Bacillota
GGT
Thr
>WENV180123960
OASX01000757
148188
Bacillota
CCG
Arg
>WENV180123901
OASX01000500
80612
Bacillota
GTA
Tyr
>WENV180123791
OASX01000240
80612
Bacillota
GTA
Tyr
>WENV180123817
OASX01000269
235127
Bacillota
TTT
Lys
>WENV180123698
OASX01000130
235127
Bacillota
TTT
Lys
>WENV180124379
OASX01009913
235197
Bacillota
GTC
Asp
>WENV180124381
OASX01009913
368876
Bacillota
GCC
Gly
>WENV180123814
OASX01000269
147674
Bacillota
TCT
Arg
>WENV180124532
OASX01023121
113612
Bacillota
TAG
Leu
>WENV180124436
OASX01013136
235288
Bacillota
TAC
Val
>WENV180124371
OASX01009840
411739
Bacillota
TCC
Gly
>WENV180124326
OASX01007517
411739
Bacillota
TCC
Gly
>WENV180124309
OASX01006308
411739
Bacillota
TCC
Gly
>WENV180124308
OASX01006308
411739
Bacillota
TCC
Gly
>WENV180124246
OASX01004552
411739
Bacillota
TCC
Gly
>WENV180124226
OASX01004074
411739
Bacillota
TCC
Gly
>WENV180124652
OASX01062270
235638
Bacillota
GAA
Phe
>WENV180124034
OASX01001341
235124
Bacillota
TGG
Pro
>WENV180124663
OASX01062845
235506
Bacillota
TGC
Ala
>WENV180124600
OASX01037329
163753
Bacillota
TGG
Pro
>WENV180124248
OASX01004552
237963
Bacillota
TTT
Lys
>WENV180124375
OASX01009840
237963
Bacillota
TTT
Lys
>WENV180124255
OASX01004669
338129
Bacillota
TGT
Thr
>WENV180124508
OASX01020716
279635
Bacillota
GTG
His
>WENV180124373
OASX01009840
279635
Bacillota
GTG
His
>WENV180124327
OASX01007517
279635
Bacillota
GTG
His
>WENV180124629
OASX01051832
157838
Bacillota
GTC
Asp
>WENV180124362
OASX01009539
243613
Bacillota
GTG
His
>WENV180123937
OASX01000635
144583
Bacillota
ACG
Arg
>WENV180124464
OASX01015464
144672
Bacillota
TCT
Arg
>WENV180124056
OASX01001489
144672
Bacillota
TCT
Arg
>WENV180123983
OASX01000947
144672
Bacillota
TCT
Arg
>WENV180123892
OASX01000491
419877
Bacillota
TCC
Gly
>WENV180123758
OASX01000208
419877
Bacillota
TCC
Gly
>WENV180123952
OASX01000695
235171
Bacillota
CCA
Trp
>WENV180124042
OASX01001382
144621
Bacillota
GTT
Asn
>WENV180123992
OASX01000968
144621
Bacillota
GTT
Asn
>WENV180124507
OASX01020716
145383
Bacillota
TCT
Arg
>WENV180124599
OASX01037329
235292
Bacillota
CCA
Trp
>WENV180124152
OASX01002493
152491
Bacillota
CAT
Met
>WENV180124481
OASX01017390
353527
Bacillota
TTC
Glu
>WENV180124478
OASX01017390
353527
Bacillota
TTC
Glu
>WENV180124245
OASX01004552
353527
Bacillota
TTC
Glu
>WENV180123866
OASX01000398
58712
Bacillota
CAG
Leu
>WENV180123811
OASX01000257
58712
Bacillota
CAG
Leu
>WENV180124410
OASX01011851
144762
Bacillota
TCT
Arg
>WENV180124162
OASX01002679
245296
Bacillota
CCC
Gly
>WENV180124459
OASX01015050
272992
Bacillota
CTT
Lys
>WENV180124148
OASX01002493
273029
Bacillota
TGT
Thr
>WENV180124151
OASX01002493
281472
Bacillota
GGT
Thr
>WENV180124425
OASX01012795
338545
Bacillota
>WENV180123893
OASX01000491
157635
Bacillota
TCT
Arg
>WENV180123874
OASX01000409
144594
Bacillota
CAC
Val
>WENV180124541
OASX01024527
272488
Bacillota
GAA
Phe
>WENV180123760
OASX01000208
272488
Bacillota
GAA
Phe
>WENV180123697
OASX01000130
272488
Bacillota
GAA
Phe
>WENV180123964
OASX01000812
238945
Bacillota
GCC
Gly
>WENV180124610
OASX01042118
249259
Bacillota
GCC
Gly
>WENV180123803
OASX01000252
249259
Bacillota
GCC
Gly
>WENV180123799
OASX01000252
249259
Bacillota
GCC
Gly
>WENV180123789
OASX01000240
249259
Bacillota
GCC
Gly
>WENV180123787
OASX01000240
249259
Bacillota
GCC
Gly
>WENV180124520
OASX01022196
273862
Bacillota
TGC
Ala
>WENV180124363
OASX01009539
343027
Bacillota
TTG
Gln
>WENV180124504
OASX01020450
338131
Bacillota
GCC
Gly
>WENV180124424
OASX01012630
338131
Bacillota
GCC
Gly
>WENV180124128
OASX01002288
338131
Bacillota
GCC
Gly
>WENV180123900
OASX01000494
338131
Bacillota
GCC
Gly
>WENV180123607
OASX01000050
338131
Bacillota
GCC
Gly
>WENV180124114
OASX01002152
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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