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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
175 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180476946
OBYZ01000071
24650
Bacillota
TAA
Leu
>WENV180477615
OBYZ01002634
243647
Bacillota
TTT
Lys
>WENV180477695
OBYZ01005738
243647
Bacillota
TTT
Lys
>WENV180477947
OBYZ01055734
37110
Bacillota
TAA
Leu
>WENV180477492
OBYZ01001025
16842
Bacillota
CGA
Ser
>WENV180477898
OBYZ01034526
194265
Bacillota
CAT
Met
>WENV180477317
OBYZ01000449
37213
Bacillota
TGA
Ser
>WENV180477444
OBYZ01000826
144612
Bacillota
TCT
Arg
>WENV180477649
OBYZ01004196
267649
Bacillota
TAC
Val
>WENV180477589
OBYZ01002197
267649
Bacillota
TAC
Val
>WENV180477474
OBYZ01000977
267556
Bacillota
TAC
Val
>WENV180477368
OBYZ01000534
267556
Bacillota
TAC
Val
>WENV180477348
OBYZ01000509
267556
Bacillota
TAC
Val
>WENV180477159
OBYZ01000246
267556
Bacillota
TAC
Val
>WENV180477072
OBYZ01000164
267556
Bacillota
TAC
Val
>WENV180476887
OBYZ01000034
267556
Bacillota
TAC
Val
>WENV180476898
OBYZ01000044
16815
Bacillota
TGA
Ser
>WENV180476897
OBYZ01000044
16815
Bacillota
TGA
Ser
>WENV180477903
OBYZ01035056
339890
Bacillota
TTG
Gln
>WENV180477413
OBYZ01000715
235098
Bacillota
GAC
Val
>WENV180477100
OBYZ01000194
235098
Bacillota
GAC
Val
>WENV180477208
OBYZ01000292
338152
Bacillota
TTC
Glu
>WENV180477922
OBYZ01042671
338544
Bacillota
TGT
Thr
>WENV180477479
OBYZ01000977
148239
Bacillota
TCT
Arg
>WENV180477169
OBYZ01000257
148239
Bacillota
TCT
Arg
>WENV180477146
OBYZ01000236
148239
Bacillota
TCT
Arg
>WENV180477250
OBYZ01000362
44854
Bacillota
TGA
Ser
>WENV180477951
OBYZ01056795
235154
Bacillota
GTT
Asn
>WENV180476984
OBYZ01000095
235154
Bacillota
GTT
Asn
>WENV180477668
OBYZ01004948
246023
Bacillota
TGC
Ala
>WENV180476891
OBYZ01000036
59312
Bacillota
CAG
Leu
>WENV180477890
OBYZ01032467
238910
Bacillota
CTT
Lys
>WENV180476793
OBYZ01000002
338147
Bacillota
CTC
Glu
>WENV180476792
OBYZ01000002
338147
Bacillota
CTC
Glu
>WENV180476791
OBYZ01000002
338147
Bacillota
CTC
Glu
>WENV180477739
OBYZ01008310
235150
Bacillota
TGC
Ala
>WENV180477685
OBYZ01005539
235150
Bacillota
TGC
Ala
>WENV180477889
OBYZ01032342
114359
Bacillota
TAG
Leu
>WENV180477814
OBYZ01017291
235137
Bacillota
TGC
Ala
>WENV180477802
OBYZ01014687
235137
Bacillota
TGC
Ala
>WENV180477706
OBYZ01005992
235294
Bacillota
TGC
Ala
>WENV180477827
OBYZ01018479
340802
Bacillota
TTG
Gln
>WENV180477690
OBYZ01005603
340802
Bacillota
TTG
Gln
>WENV180476846
OBYZ01000018
340802
Bacillota
TTG
Gln
>WENV180477638
OBYZ01003662
338143
Bacillota
CTC
Glu
>WENV180477004
OBYZ01000109
291442
Bacillota
CTT
Lys
>WENV180477750
OBYZ01009319
341763
Bacillota
CTC
Glu
>WENV180477820
OBYZ01017690
243378
Bacillota
TGG
Pro
>WENV180477429
OBYZ01000743
243378
Bacillota
TGG
Pro
>WENV180477196
OBYZ01000275
243378
Bacillota
TGG
Pro
>WENV180476899
OBYZ01000044
18548
Bacillota
GCT
Ser
>WENV180477265
OBYZ01000372
182792
Bacillota
GTC
Asp
>WENV180477080
OBYZ01000167
182792
Bacillota
GTC
Asp
>WENV180476933
OBYZ01000066
182792
Bacillota
GTC
Asp
>WENV180477722
OBYZ01006887
16834
Bacillota
GCT
Ser
>WENV180477077
OBYZ01000167
11034
Bacillota
GGA
Ser
>WENV180476932
OBYZ01000066
235117
Bacillota
TAC
Val
>WENV180477147
OBYZ01000236
156937
Bacillota
GTG
His
>WENV180477753
OBYZ01009658
114002
Bacillota
CAA
Leu
>WENV180477931
OBYZ01046877
37437
Bacillota
TAA
Leu
>WENV180477078
OBYZ01000167
235079
Bacillota
GAA
Phe
>WENV180476934
OBYZ01000066
235079
Bacillota
GAA
Phe
>WENV180477701
OBYZ01005738
243612
Bacillota
TAC
Val
>WENV180477697
OBYZ01005738
243612
Bacillota
TAC
Val
>WENV180477523
OBYZ01001178
149041
Bacillota
GTC
Asp
>WENV180477451
OBYZ01000863
149041
Bacillota
GTC
Asp
>WENV180477132
OBYZ01000224
338149
Bacillota
CTC
Glu
>WENV180477029
OBYZ01000126
338149
Bacillota
CTC
Glu
>WENV180477836
OBYZ01018756
144766
Bacillota
CAT
Met
>WENV180477257
OBYZ01000368
245298
Bacillota
CGG
Pro
>WENV180477683
OBYZ01005527
37269
Bacillota
TGA
Ser
>WENV180477439
OBYZ01000801
37269
Bacillota
TGA
Ser
>WENV180477253
OBYZ01000365
37269
Bacillota
TGA
Ser
>WENV180476849
OBYZ01000018
37269
Bacillota
TGA
Ser
>WENV180477590
OBYZ01002197
155089
Bacillota
CAT
Met
>WENV180476888
OBYZ01000034
155089
Bacillota
CAT
Met
>WENV180476995
OBYZ01000102
287000
Bacillota
GTT
Asn
>WENV180477424
OBYZ01000729
258936
Bacillota
GGT
Thr
>WENV180477387
OBYZ01000590
169968
Bacillota
CAT
Met
>WENV180477191
OBYZ01000272
169968
Bacillota
CAT
Met
>WENV180477677
OBYZ01005390
413152
Bacillota
TCC
Gly
>WENV180477181
OBYZ01000268
162445
Bacillota
CAT
Met
>WENV180477155
OBYZ01000242
162445
Bacillota
CAT
Met
>WENV180477627
OBYZ01003203
152492
Bacillota
GGG
Pro
>WENV180477315
OBYZ01000445
152492
Bacillota
GGG
Pro
>WENV180477458
OBYZ01000898
344320
Bacillota
GTT
Asn
>WENV180477593
OBYZ01002252
147135
Bacillota
ACG
Arg
>WENV180477473
OBYZ01000977
144599
Bacillota
GTC
Asp
>WENV180477367
OBYZ01000534
144599
Bacillota
GTC
Asp
>WENV180477158
OBYZ01000246
144599
Bacillota
GTC
Asp
>WENV180477370
OBYZ01000534
100326
Bacillota
GTA
Tyr
>WENV180477086
OBYZ01000173
100326
Bacillota
GTA
Tyr
>WENV180476973
OBYZ01000081
100326
Bacillota
GTA
Tyr
>WENV180476928
OBYZ01000062
100326
Bacillota
GTA
Tyr
>WENV180477689
OBYZ01005603
144610
Bacillota
GTG
His
>WENV180477480
OBYZ01000977
144610
Bacillota
GTG
His
>WENV180477323
OBYZ01000463
144610
Bacillota
GTG
His
>WENV180477170
OBYZ01000257
144610
Bacillota
GTG
His
>WENV180476845
OBYZ01000018
144610
Bacillota
GTG
His
>WENV180477459
OBYZ01000898
353537
Bacillota
GTT
Asn
>WENV180477195
OBYZ01000275
353537
Bacillota
GTT
Asn
>WENV180477194
OBYZ01000274
268227
Bacillota
CCA
Trp
>WENV180477382
OBYZ01000572
411547
Bacillota
CTG
Gln
>WENV180477256
OBYZ01000368
411547
Bacillota
CTG
Gln
>WENV180477328
OBYZ01000466
147684
Bacillota
ACG
Arg
>WENV180477251
OBYZ01000362
4624
Bacillota
GCT
Ser
>WENV180477913
OBYZ01038387
235637
Bacillota
TAC
Val
>WENV180477549
OBYZ01001533
342895
Bacillota
CAT
Met
>WENV180477826
OBYZ01018322
412387
Bacillota
GCA
Cys
>WENV180477747
OBYZ01008902
18852
Bacillota
GCT
Ser
>WENV180477268
OBYZ01000372
235095
Bacillota
GGT
Thr
>WENV180477266
OBYZ01000372
235095
Bacillota
GGT
Thr
>WENV180477352
OBYZ01000512
344183
Bacillota
CTG
Gln
>WENV180477521
OBYZ01001178
239832
Bacillota
TGT
Thr
>WENV180477453
OBYZ01000863
239832
Bacillota
TGT
Thr
>WENV180477822
OBYZ01017690
150597
Bacillota
TCT
Arg
>WENV180477819
OBYZ01017690
150597
Bacillota
TCT
Arg
>WENV180477508
OBYZ01001104
250349
Bacillota
GAA
Phe
>WENV180477460
OBYZ01000898
353848
Bacillota
GTT
Asn
>WENV180477330
OBYZ01000476
411549
Bacillota
TTG
Gln
>WENV180477735
OBYZ01008077
59296
Bacillota
AAG
Leu
>WENV180477553
OBYZ01001659
148188
Bacillota
CCG
Arg
>WENV180477402
OBYZ01000664
80612
Bacillota
GTA
Tyr
>WENV180477271
OBYZ01000379
80612
Bacillota
GTA
Tyr
>WENV180476867
OBYZ01000026
256380
Bacillota
>WENV180477507
OBYZ01001104
235197
Bacillota
GTC
Asp
>WENV180477698
OBYZ01005738
368876
Bacillota
GCC
Gly
>WENV180477886
OBYZ01032342
235905
Bacillota
GTG
His
>WENV180477723
OBYZ01007177
235638
Bacillota
GAA
Phe
>WENV180477422
OBYZ01000729
235638
Bacillota
GAA
Phe
>WENV180477212
OBYZ01000294
235638
Bacillota
GAA
Phe
>WENV180477258
OBYZ01000368
235124
Bacillota
TGG
Pro
>WENV180477888
OBYZ01032342
237963
Bacillota
TTT
Lys
>WENV180477613
OBYZ01002634
243613
Bacillota
GTG
His
>WENV180477057
OBYZ01000147
144583
Bacillota
ACG
Arg
>WENV180476970
OBYZ01000081
144652
Bacillota
GTC
Asp
>WENV180477264
OBYZ01000372
235171
Bacillota
CCA
Trp
>WENV180477372
OBYZ01000534
238974
Bacillota
GAA
Phe
>WENV180477280
OBYZ01000400
238974
Bacillota
GAA
Phe
>WENV180477517
OBYZ01001166
144621
Bacillota
GTT
Asn
>WENV180477133
OBYZ01000224
144621
Bacillota
GTT
Asn
>WENV180477832
OBYZ01018627
152491
Bacillota
CAT
Met
>WENV180477446
OBYZ01000826
58712
Bacillota
CAG
Leu
>WENV180477401
OBYZ01000664
58712
Bacillota
CAG
Leu
>WENV180477874
OBYZ01029054
144762
Bacillota
TCT
Arg
>WENV180477431
OBYZ01000756
245296
Bacillota
CCC
Gly
>WENV180477131
OBYZ01000224
272992
Bacillota
CTT
Lys
>WENV180477030
OBYZ01000126
272992
Bacillota
CTT
Lys
>WENV180477831
OBYZ01018627
281472
Bacillota
GGT
Thr
>WENV180477688
OBYZ01005603
157635
Bacillota
TCT
Arg
>WENV180476844
OBYZ01000018
157635
Bacillota
TCT
Arg
>WENV180477450
OBYZ01000860
144594
Bacillota
CAC
Val
>WENV180477694
OBYZ01005621
413657
Bacillota
CCC
Gly
>WENV180476866
OBYZ01000026
414486
Bacillota
CCC
Gly
>WENV180477192
OBYZ01000272
272488
Bacillota
GAA
Phe
>WENV180477019
OBYZ01000119
272488
Bacillota
GAA
Phe
>WENV180477483
OBYZ01000977
114075
Bacillota
TAG
Leu
>WENV180477914
OBYZ01038387
144967
Bacillota
GTC
Asp
>WENV180477946
OBYZ01055623
238945
Bacillota
GCC
Gly
>WENV180477557
OBYZ01001716
238945
Bacillota
GCC
Gly
>WENV180477306
OBYZ01000443
238945
Bacillota
GCC
Gly
>WENV180477123
OBYZ01000219
238945
Bacillota
GCC
Gly
>WENV180477122
OBYZ01000219
238945
Bacillota
GCC
Gly
>WENV180477023
OBYZ01000120
238945
Bacillota
GCC
Gly
>WENV180477022
OBYZ01000120
238945
Bacillota
GCC
Gly
>WENV180477081
OBYZ01000167
249259
Bacillota
GCC
Gly
>WENV180477079
OBYZ01000167
249259
Bacillota
GCC
Gly
>WENV180476935
OBYZ01000066
249259
Bacillota
GCC
Gly
>WENV180476931
OBYZ01000066
249259
Bacillota
GCC
Gly
>WENV180477699
OBYZ01005738
287034
Bacillota
GTT
Asn
>WENV180477884
OBYZ01030310
273862
Bacillota
TGC
Ala
>WENV180477614
OBYZ01002634
343027
Bacillota
TTG
Gln
>WENV180477660
OBYZ01004661
338131
Bacillota
GCC
Gly
>WENV180477757
OBYZ01009937
338207
Bacillota
TTC
Glu
>WENV180477056
OBYZ01000147
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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