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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
220 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170705667
LNAP01000100
780716
Gammaproteobacteria
GCA
Cys
>WENV170706328
LNAP01002099
780716
Gammaproteobacteria
GCA
Cys
>WENV170708464
LNAP01084727
780716
Gammaproteobacteria
GCA
Cys
>WENV170705760
LNAP01000212
271411
Gammaproteobacteria
GGG
Pro
>WENV170705832
LNAP01000434
271411
Gammaproteobacteria
GGG
Pro
>WENV170705985
LNAP01000783
271411
Gammaproteobacteria
GGG
Pro
>WENV170706019
LNAP01000846
271411
Gammaproteobacteria
GGG
Pro
>WENV170706176
LNAP01001526
271411
Gammaproteobacteria
GGG
Pro
>WENV170706391
LNAP01002784
271411
Gammaproteobacteria
GGG
Pro
>WENV170706535
LNAP01003998
271411
Gammaproteobacteria
GGG
Pro
>WENV170706917
LNAP01008989
271411
Gammaproteobacteria
GGG
Pro
>WENV170707330
LNAP01017654
271411
Gammaproteobacteria
GGG
Pro
>WENV170707437
LNAP01020747
271411
Gammaproteobacteria
GGG
Pro
>WENV170707551
LNAP01025165
271411
Gammaproteobacteria
GGG
Pro
>WENV170707678
LNAP01029221
271411
Gammaproteobacteria
GGG
Pro
>WENV170707828
LNAP01035506
271411
Gammaproteobacteria
GGG
Pro
>WENV170708081
LNAP01048775
271411
Gammaproteobacteria
GGG
Pro
>WENV170708520
LNAP01090605
271411
Gammaproteobacteria
GGG
Pro
>WENV170708577
LNAP01098893
271411
Gammaproteobacteria
GGG
Pro
>WENV170708592
LNAP01099079
271411
Gammaproteobacteria
GGG
Pro
>WENV170708077
LNAP01048565
456952
Gammaproteobacteria
CGC
Ala
>WENV170705656
LNAP01000074
112358
Gammaproteobacteria
TAA
Leu
>WENV170705668
LNAP01000100
112358
Gammaproteobacteria
TAA
Leu
>WENV170706126
LNAP01001249
112358
Gammaproteobacteria
TAA
Leu
>WENV170706329
LNAP01002099
112358
Gammaproteobacteria
TAA
Leu
>WENV170706610
LNAP01004627
112358
Gammaproteobacteria
TAA
Leu
>WENV170706768
LNAP01006362
112358
Gammaproteobacteria
TAA
Leu
>WENV170708054
LNAP01046728
112358
Gammaproteobacteria
TAA
Leu
>WENV170708244
LNAP01062213
112358
Gammaproteobacteria
TAA
Leu
>WENV170708291
LNAP01066254
112358
Gammaproteobacteria
TAA
Leu
>WENV170708401
LNAP01078543
112358
Gammaproteobacteria
TAA
Leu
>WENV170708624
LNAP01099939
112358
Gammaproteobacteria
TAA
Leu
>WENV170708299
LNAP01066948
454816
Gammaproteobacteria
TGT
Thr
>WENV170707087
LNAP01012289
779438
Gammaproteobacteria
TCC
Gly
>WENV170706746
LNAP01006083
781634
Gammaproteobacteria
GCA
Cys
>WENV170707448
LNAP01021204
781634
Gammaproteobacteria
GCA
Cys
>WENV170708009
LNAP01043951
781634
Gammaproteobacteria
GCA
Cys
>WENV170708623
LNAP01099939
781634
Gammaproteobacteria
GCA
Cys
>WENV170706540
LNAP01004041
271725
Gammaproteobacteria
CAT
Met
>WENV170706549
LNAP01004145
271725
Gammaproteobacteria
CAT
Met
>WENV170707399
LNAP01019531
271725
Gammaproteobacteria
CAT
Met
>WENV170707444
LNAP01021027
271725
Gammaproteobacteria
CAT
Met
>WENV170708574
LNAP01098709
179922
Gammaproteobacteria
TAG
Leu
>WENV170705726
LNAP01000153
45746
Gammaproteobacteria
CGA
Ser
>WENV170706735
LNAP01005945
112422
Gammaproteobacteria
CAG
Leu
>WENV170706030
LNAP01000909
30386
Gammaproteobacteria
TGA
Ser
>WENV170706149
LNAP01001388
30386
Gammaproteobacteria
TGA
Ser
>WENV170706646
LNAP01005126
30386
Gammaproteobacteria
TGA
Ser
>WENV170706899
LNAP01008596
30386
Gammaproteobacteria
TGA
Ser
>WENV170706409
LNAP01002964
455856
Gammaproteobacteria
TGT
Thr
>WENV170706895
LNAP01008471
455856
Gammaproteobacteria
TGT
Thr
>WENV170708056
LNAP01046786
455856
Gammaproteobacteria
TGT
Thr
>WENV170708058
LNAP01046947
455856
Gammaproteobacteria
TGT
Thr
>WENV170708350
LNAP01071911
455856
Gammaproteobacteria
TGT
Thr
>WENV170708431
LNAP01081262
460690
Gammaproteobacteria
TGT
Thr
>WENV170706303
LNAP01001932
655119
Gammaproteobacteria
CAC
Val
>WENV170706326
LNAP01002096
270679
Gammaproteobacteria
CCG
Arg
>WENV170706568
LNAP01004285
270679
Gammaproteobacteria
CCG
Arg
>WENV170707409
LNAP01019753
456552
Gammaproteobacteria
TGT
Thr
>WENV170707666
LNAP01028936
456552
Gammaproteobacteria
TGT
Thr
>WENV170706614
LNAP01004674
300085
Gammaproteobacteria
ACG
Arg
>WENV170707920
LNAP01039904
53397
Gammaproteobacteria
GGA
Ser
>WENV170707595
LNAP01026580
324841
Gammaproteobacteria
CAT
Met
>WENV170707289
LNAP01016707
320299
Gammaproteobacteria
GTC
Asp
>WENV170707290
LNAP01016707
320299
Gammaproteobacteria
GTC
Asp
>WENV170705976
LNAP01000743
271107
Gammaproteobacteria
CAT
Met
>WENV170705653
LNAP01000072
455188
Gammaproteobacteria
TAC
Val
>WENV170705967
LNAP01000719
455188
Gammaproteobacteria
TAC
Val
>WENV170706217
LNAP01001730
455188
Gammaproteobacteria
TAC
Val
>WENV170706219
LNAP01001730
455188
Gammaproteobacteria
TAC
Val
>WENV170707860
LNAP01037128
455188
Gammaproteobacteria
TAC
Val
>WENV170708549
LNAP01094514
455188
Gammaproteobacteria
TAC
Val
>WENV170708662
LNAP01101402
455188
Gammaproteobacteria
TAC
Val
>WENV170705882
LNAP01000566
45751
Gammaproteobacteria
GGA
Ser
>WENV170706961
LNAP01009874
180135
Gammaproteobacteria
CAA
Leu
>WENV170707482
LNAP01022231
180135
Gammaproteobacteria
CAA
Leu
>WENV170707784
LNAP01034052
180135
Gammaproteobacteria
CAA
Leu
>WENV170708008
LNAP01043947
180135
Gammaproteobacteria
CAA
Leu
>WENV170708150
LNAP01053474
180135
Gammaproteobacteria
CAA
Leu
>WENV170708672
LNAP01101563
180135
Gammaproteobacteria
CAA
Leu
>WENV170707833
LNAP01035908
472378
Gammaproteobacteria
CGC
Ala
>WENV170706722
LNAP01005879
472378
Gammaproteobacteria
CGC
Ala
>WENV170707623
LNAP01027702
472378
Gammaproteobacteria
CGC
Ala
>WENV170707193
LNAP01014992
282093
Gammaproteobacteria
GTC
Asp
>WENV170706867
LNAP01007821
452337
Gammaproteobacteria
GTT
Asn
>WENV170707313
LNAP01017178
452337
Gammaproteobacteria
GTT
Asn
>WENV170707318
LNAP01017269
452337
Gammaproteobacteria
GTT
Asn
>WENV170707486
LNAP01022436
452337
Gammaproteobacteria
GTT
Asn
>WENV170707655
LNAP01028526
452337
Gammaproteobacteria
GTT
Asn
>WENV170708605
LNAP01099431
452337
Gammaproteobacteria
GTT
Asn
>WENV170708667
LNAP01101463
452337
Gammaproteobacteria
GTT
Asn
>WENV170706605
LNAP01004585
275720
Gammaproteobacteria
CCG
Arg
>WENV170705846
LNAP01000479
46100
Gammaproteobacteria
GGA
Ser
>WENV170706384
LNAP01002698
46100
Gammaproteobacteria
GGA
Ser
>WENV170707773
LNAP01033253
46100
Gammaproteobacteria
GGA
Ser
>WENV170705959
LNAP01000704
30299
Gammaproteobacteria
CGA
Ser
>WENV170707340
LNAP01017998
30299
Gammaproteobacteria
CGA
Ser
>WENV170707758
LNAP01032773
30299
Gammaproteobacteria
CGA
Ser
>WENV170708669
LNAP01101525
30299
Gammaproteobacteria
CGA
Ser
>WENV170706711
LNAP01005866
451640
Gammaproteobacteria
TTC
Glu
>WENV170706319
LNAP01002045
180068
Gammaproteobacteria
TAG
Leu
>WENV170706190
LNAP01001604
180370
Gammaproteobacteria
CAA
Leu
>WENV170706223
LNAP01001740
45747
Gammaproteobacteria
GGA
Ser
>WENV170705724
LNAP01000150
86946
Gammaproteobacteria
TGA
Ser
>WENV170705797
LNAP01000346
86946
Gammaproteobacteria
TGA
Ser
>WENV170706115
LNAP01001184
86946
Gammaproteobacteria
TGA
Ser
>WENV170706472
LNAP01003357
86946
Gammaproteobacteria
TGA
Ser
>WENV170707072
LNAP01012159
86946
Gammaproteobacteria
TGA
Ser
>WENV170707471
LNAP01021970
86946
Gammaproteobacteria
TGA
Ser
>WENV170707632
LNAP01027908
86946
Gammaproteobacteria
TGA
Ser
>WENV170707741
LNAP01031853
86946
Gammaproteobacteria
TGA
Ser
>WENV170707862
LNAP01037164
274999
Gammaproteobacteria
ACG
Arg
>WENV170708011
LNAP01044009
274999
Gammaproteobacteria
ACG
Arg
>WENV170706052
LNAP01001010
275462
Gammaproteobacteria
TCT
Arg
>WENV170708559
LNAP01095640
779594
Gammaproteobacteria
CCC
Gly
>WENV170705658
LNAP01000078
779594
Gammaproteobacteria
CCC
Gly
>WENV170705894
LNAP01000580
779594
Gammaproteobacteria
CCC
Gly
>WENV170706125
LNAP01001235
779594
Gammaproteobacteria
CCC
Gly
>WENV170706130
LNAP01001264
779594
Gammaproteobacteria
CCC
Gly
>WENV170706178
LNAP01001544
779594
Gammaproteobacteria
CCC
Gly
>WENV170706687
LNAP01005629
779594
Gammaproteobacteria
CCC
Gly
>WENV170706757
LNAP01006170
779594
Gammaproteobacteria
CCC
Gly
>WENV170706952
LNAP01009695
779594
Gammaproteobacteria
CCC
Gly
>WENV170706956
LNAP01009720
779594
Gammaproteobacteria
CCC
Gly
>WENV170707953
LNAP01041563
779594
Gammaproteobacteria
CCC
Gly
>WENV170708282
LNAP01065312
779594
Gammaproteobacteria
CCC
Gly
>WENV170708302
LNAP01067077
779594
Gammaproteobacteria
CCC
Gly
>WENV170708304
LNAP01067242
779594
Gammaproteobacteria
CCC
Gly
>WENV170706597
LNAP01004493
780642
Gammaproteobacteria
GCA
Cys
>WENV170706318
LNAP01002045
452332
Gammaproteobacteria
GTG
His
>WENV170708563
LNAP01095901
452332
Gammaproteobacteria
GTG
His
>WENV170707603
LNAP01026941
179997
Gammaproteobacteria
GTA
Tyr
>WENV170705678
LNAP01000116
456993
Gammaproteobacteria
GTG
His
>WENV170706454
LNAP01003188
277067
Gammaproteobacteria
CCG
Arg
>WENV170707029
LNAP01011153
277067
Gammaproteobacteria
CCG
Arg
>WENV170707045
LNAP01011607
780704
Gammaproteobacteria
GCA
Cys
>WENV170708643
LNAP01100752
30385
Gammaproteobacteria
GCT
Ser
>WENV170707046
LNAP01011635
113220
Gammaproteobacteria
CAG
Leu
>WENV170708575
LNAP01098709
655021
Gammaproteobacteria
TTG
Gln
>WENV170707648
LNAP01028339
454636
Gammaproteobacteria
GAA
Phe
>WENV170706211
LNAP01001690
271414
Gammaproteobacteria
CCT
Arg
>WENV170707495
LNAP01022810
271414
Gammaproteobacteria
CCT
Arg
>WENV170707722
LNAP01031304
271414
Gammaproteobacteria
CCT
Arg
>WENV170706053
LNAP01001010
451876
Gammaproteobacteria
GTG
His
>WENV170707605
LNAP01026941
451869
Gammaproteobacteria
GGT
Thr
>WENV170707710
LNAP01030664
451869
Gammaproteobacteria
GGT
Thr
>WENV170708224
LNAP01060304
451869
Gammaproteobacteria
GGT
Thr
>WENV170706108
LNAP01001157
658266
Gammaproteobacteria
CTT
Lys
>WENV170705998
LNAP01000805
3393
Gammaproteobacteria
>WENV170706893
LNAP01008467
180134
Gammaproteobacteria
TAG
Leu
>WENV170705871
LNAP01000542
275518
Gammaproteobacteria
ACG
Arg
>WENV170706499
LNAP01003630
275518
Gammaproteobacteria
ACG
Arg
>WENV170708603
LNAP01099379
275518
Gammaproteobacteria
ACG
Arg
>WENV170708604
LNAP01099379
275518
Gammaproteobacteria
ACG
Arg
>WENV170708290
LNAP01066191
273719
Gammaproteobacteria
CAT
Met
>WENV170708576
LNAP01098709
655022
Gammaproteobacteria
TTG
Gln
>WENV170708691
LNAP01102263
452377
Gammaproteobacteria
GTT
Asn
>WENV170706317
LNAP01002021
452377
Gammaproteobacteria
GTT
Asn
>WENV170706292
LNAP01001890
452377
Gammaproteobacteria
GTT
Asn
>WENV170706205
LNAP01001682
452377
Gammaproteobacteria
GTT
Asn
>WENV170706732
LNAP01005931
274252
Gammaproteobacteria
CAT
Met
>WENV170706940
LNAP01009416
274252
Gammaproteobacteria
CAT
Met
>WENV170707024
LNAP01011075
274252
Gammaproteobacteria
CAT
Met
>WENV170707406
LNAP01019704
274252
Gammaproteobacteria
CAT
Met
>WENV170707412
LNAP01019874
274252
Gammaproteobacteria
CAT
Met
>WENV170707847
LNAP01036728
274252
Gammaproteobacteria
CAT
Met
>WENV170708372
LNAP01074808
274252
Gammaproteobacteria
CAT
Met
>WENV170708638
LNAP01100635
274252
Gammaproteobacteria
CAT
Met
>WENV170705840
LNAP01000455
655007
Gammaproteobacteria
CTG
Gln
>WENV170706203
LNAP01001665
270906
Gammaproteobacteria
CCG
Arg
>WENV170707688
LNAP01029712
270584
Gammaproteobacteria
ACG
Arg
>WENV170707689
LNAP01029712
270584
Gammaproteobacteria
ACG
Arg
>WENV170707921
LNAP01039904
53316
Gammaproteobacteria
GGA
Ser
>WENV170707232
LNAP01015761
153942
Gammaproteobacteria
GAG
Leu
>WENV170705918
LNAP01000613
454471
Gammaproteobacteria
TGT
Thr
>WENV170707795
LNAP01034341
454471
Gammaproteobacteria
TGT
Thr
>WENV170706373
LNAP01002611
112421
Gammaproteobacteria
TAA
Leu
>WENV170706518
LNAP01003818
271409
Gammaproteobacteria
CCG
Arg
>WENV170707898
LNAP01038470
180588
Gammaproteobacteria
CAA
Leu
>WENV170706488
LNAP01003506
271727
Gammaproteobacteria
CCG
Arg
>WENV170706497
LNAP01003595
271727
Gammaproteobacteria
CCG
Arg
>WENV170706604
LNAP01004573
271727
Gammaproteobacteria
CCG
Arg
>WENV170706912
LNAP01008856
271727
Gammaproteobacteria
CCG
Arg
>WENV170707952
LNAP01041544
180312
Gammaproteobacteria
CAA
Leu
>WENV170705993
LNAP01000791
779670
Gammaproteobacteria
CCC
Gly
>WENV170707611
LNAP01027269
780165
Gammaproteobacteria
GCA
Cys
>WENV170708111
LNAP01050743
511115
Gammaproteobacteria
CTT
Lys
>WENV170707645
LNAP01028297
160932
Gammaproteobacteria
CAG
Leu
>WENV170707524
LNAP01023751
454051
Gammaproteobacteria
GGT
Thr
>WENV170708519
LNAP01090550
454051
Gammaproteobacteria
GGT
Thr
>WENV170707599
LNAP01026719
655379
Gammaproteobacteria
CTG
Gln
>WENV170707882
LNAP01037794
655379
Gammaproteobacteria
CTG
Gln
>WENV170707804
LNAP01034601
511114
Gammaproteobacteria
TTT
Lys
>WENV170707612
LNAP01027269
160931
Gammaproteobacteria
TAA
Leu
>WENV170705905
LNAP01000611
275185
Gammaproteobacteria
CAT
Met
>WENV170706869
LNAP01007850
653472
Gammaproteobacteria
CTC
Glu
>WENV170706101
LNAP01001108
273025
Gammaproteobacteria
CCT
Arg
>WENV170706533
LNAP01003981
273025
Gammaproteobacteria
CCT
Arg
>WENV170706645
LNAP01005118
273025
Gammaproteobacteria
CCT
Arg
>WENV170707103
LNAP01012718
273025
Gammaproteobacteria
CCT
Arg
>WENV170707355
LNAP01018455
273025
Gammaproteobacteria
CCT
Arg
>WENV170707542
LNAP01024611
273025
Gammaproteobacteria
CCT
Arg
>WENV170707680
LNAP01029273
273025
Gammaproteobacteria
CCT
Arg
>WENV170707914
LNAP01039507
273025
Gammaproteobacteria
CCT
Arg
>WENV170708044
LNAP01046205
273025
Gammaproteobacteria
CCT
Arg
>WENV170708501
LNAP01088613
273025
Gammaproteobacteria
CCT
Arg
>WENV170706997
LNAP01010657
273528
Gammaproteobacteria
GGG
Pro
>WENV170707148
LNAP01013845
273528
Gammaproteobacteria
GGG
Pro
>WENV170707557
LNAP01025343
273528
Gammaproteobacteria
GGG
Pro
>WENV170708258
LNAP01063518
273528
Gammaproteobacteria
GGG
Pro
>WENV170705904
LNAP01000602
48884
Gammaproteobacteria
CGA
Ser
>WENV170708293
LNAP01066444
3406
Gammaproteobacteria
>WENV170707674
LNAP01029133
46251
Gammaproteobacteria
CGA
Ser
>WENV170706704
LNAP01005753
12251
Gammaproteobacteria
GCT
Ser
>WENV170706162
LNAP01001472
112363
Gammaproteobacteria
CAA
Leu
>WENV170707022
LNAP01011061
270904
Gammaproteobacteria
CGG
Pro
>WENV170707026
LNAP01011086
270904
Gammaproteobacteria
CGG
Pro
>WENV170706748
LNAP01006085
112359
Gammaproteobacteria
CAG
Leu
>WENV170706749
LNAP01006085
112359
Gammaproteobacteria
CAG
Leu
>WENV170706551
LNAP01004170
117395
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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