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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
140 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170010705
APMI01025775
151925
Alphaproteobacteria
CGG
Pro
>WENV170012361
APMI01160668
339360
Alphaproteobacteria
>WENV170011890
APMI01099903
126988
Alphaproteobacteria
GGG
Pro
>WENV170011891
APMI01099904
126988
Alphaproteobacteria
GGG
Pro
>WENV170011715
APMI01084771
59382
Alphaproteobacteria
CAG
Leu
>WENV170010264
APMI01012003
24760
Alphaproteobacteria
TGA
Ser
>WENV170011159
APMI01046685
24760
Alphaproteobacteria
TGA
Ser
>WENV170012410
APMI01170568
412151
Alphaproteobacteria
GCA
Cys
>WENV170010235
APMI01011178
149034
Alphaproteobacteria
GTG
His
>WENV170010465
APMI01017702
58865
Alphaproteobacteria
GAG
Leu
>WENV170011039
APMI01040761
237489
Alphaproteobacteria
CAT
Met
>WENV170010999
APMI01038620
97676
Alphaproteobacteria
CAG
Leu
>WENV170011318
APMI01055732
146903
Alphaproteobacteria
CCT
Arg
>WENV170010825
APMI01030291
144964
Alphaproteobacteria
TGG
Pro
>WENV170010894
APMI01033932
144964
Alphaproteobacteria
TGG
Pro
>WENV170009547
APMI01000683
159305
Alphaproteobacteria
GTC
Asp
>WENV170010305
APMI01013236
159305
Alphaproteobacteria
GTC
Asp
>WENV170011639
APMI01078928
159305
Alphaproteobacteria
GTC
Asp
>WENV170011977
APMI01107527
339325
Alphaproteobacteria
CAC
Val
>WENV170011940
APMI01104880
251568
Alphaproteobacteria
CCA
Trp
>WENV170011895
APMI01100521
145482
Alphaproteobacteria
CCT
Arg
>WENV170012311
APMI01150672
246184
Alphaproteobacteria
GAA
Phe
>WENV170010414
APMI01016456
96188
Alphaproteobacteria
CAG
Leu
>WENV170010512
APMI01019140
128789
Alphaproteobacteria
CCA
Trp
>WENV170010895
APMI01033932
148279
Alphaproteobacteria
TCT
Arg
>WENV170010479
APMI01018241
23685
Alphaproteobacteria
CGA
Ser
>WENV170011274
APMI01053640
23685
Alphaproteobacteria
CGA
Ser
>WENV170011309
APMI01054944
23685
Alphaproteobacteria
CGA
Ser
>WENV170012284
APMI01146529
23561
Alphaproteobacteria
GGA
Ser
>WENV170011122
APMI01044621
338282
Alphaproteobacteria
GTT
Asn
>WENV170011848
APMI01096608
96897
Alphaproteobacteria
TAG
Leu
>WENV170012009
APMI01110573
95928
Alphaproteobacteria
TAG
Leu
>WENV170011398
APMI01063035
159426
Alphaproteobacteria
CAT
Met
>WENV170012290
APMI01147895
159426
Alphaproteobacteria
CAT
Met
>WENV170012066
APMI01116355
342732
Alphaproteobacteria
CCC
Gly
>WENV170012108
APMI01121074
342732
Alphaproteobacteria
CCC
Gly
>WENV170010587
APMI01021511
23620
Alphaproteobacteria
GCT
Ser
>WENV170011625
APMI01077791
23620
Alphaproteobacteria
GCT
Ser
>WENV170011932
APMI01104240
340956
Alphaproteobacteria
TTG
Gln
>WENV170012303
APMI01149846
340956
Alphaproteobacteria
TTG
Gln
>WENV170010704
APMI01025775
340956
Alphaproteobacteria
TTG
Gln
>WENV170010706
APMI01025797
340956
Alphaproteobacteria
TTG
Gln
>WENV170011173
APMI01047474
340956
Alphaproteobacteria
TTG
Gln
>WENV170010162
APMI01010018
23624
Alphaproteobacteria
GGA
Ser
>WENV170009732
APMI01002303
146628
Alphaproteobacteria
ACG
Arg
>WENV170010910
APMI01034492
82652
Alphaproteobacteria
GTA
Tyr
>WENV170010452
APMI01017468
345376
Alphaproteobacteria
GAC
Val
>WENV170010629
APMI01023073
345376
Alphaproteobacteria
GAC
Val
>WENV170011790
APMI01090968
345376
Alphaproteobacteria
GAC
Val
>WENV170011272
APMI01053438
243630
Alphaproteobacteria
GAA
Phe
>WENV170011273
APMI01053439
243630
Alphaproteobacteria
GAA
Phe
>WENV170011545
APMI01073277
243630
Alphaproteobacteria
GAA
Phe
>WENV170012124
APMI01122665
243630
Alphaproteobacteria
GAA
Phe
>WENV170012366
APMI01162179
251610
Alphaproteobacteria
TGC
Ala
>WENV170011225
APMI01050887
148300
Alphaproteobacteria
CCA
Trp
>WENV170009616
APMI01000913
247477
Alphaproteobacteria
GTT
Asn
>WENV170011587
APMI01075282
144957
Alphaproteobacteria
TCT
Arg
>WENV170010177
APMI01010239
249928
Alphaproteobacteria
TAC
Val
>WENV170011369
APMI01061150
249928
Alphaproteobacteria
TAC
Val
>WENV170011208
APMI01049951
243803
Alphaproteobacteria
CAT
Met
>WENV170012071
APMI01116839
243803
Alphaproteobacteria
CAT
Met
>WENV170010334
APMI01014057
338289
Alphaproteobacteria
GAC
Val
>WENV170010853
APMI01031914
159395
Alphaproteobacteria
GTC
Asp
>WENV170011662
APMI01080461
159395
Alphaproteobacteria
GTC
Asp
>WENV170010909
APMI01034480
339495
Alphaproteobacteria
>WENV170010255
APMI01011666
95946
Alphaproteobacteria
GTA
Tyr
>WENV170011503
APMI01070058
95946
Alphaproteobacteria
GTA
Tyr
>WENV170009874
APMI01004407
236004
Alphaproteobacteria
TTT
Lys
>WENV170010487
APMI01018349
147214
Alphaproteobacteria
CCT
Arg
>WENV170011252
APMI01052359
339496
Alphaproteobacteria
CAC
Val
>WENV170012413
APMI01171030
59118
Alphaproteobacteria
CAG
Leu
>WENV170010766
APMI01028162
338268
Alphaproteobacteria
GAC
Val
>WENV170011714
APMI01084676
338268
Alphaproteobacteria
GAC
Val
>WENV170011055
APMI01041150
151730
Alphaproteobacteria
CCG
Arg
>WENV170012338
APMI01157185
151730
Alphaproteobacteria
CCG
Arg
>WENV170010792
APMI01029082
61017
Alphaproteobacteria
CAG
Leu
>WENV170010641
APMI01023371
339432
Alphaproteobacteria
GTT
Asn
>WENV170012226
APMI01138731
339884
Alphaproteobacteria
TTC
Glu
>WENV170011406
APMI01063570
159427
Alphaproteobacteria
GTG
His
>WENV170010470
APMI01017950
239083
Alphaproteobacteria
TGC
Ala
>WENV170011949
APMI01105951
239083
Alphaproteobacteria
TGC
Ala
>WENV170011987
APMI01108415
159476
Alphaproteobacteria
ACG
Arg
>WENV170010542
APMI01019919
23554
Alphaproteobacteria
TGA
Ser
>WENV170010035
APMI01007156
237281
Alphaproteobacteria
CGT
Thr
>WENV170010709
APMI01026005
237281
Alphaproteobacteria
CGT
Thr
>WENV170011191
APMI01048833
237281
Alphaproteobacteria
CGT
Thr
>WENV170011514
APMI01071249
237281
Alphaproteobacteria
CGT
Thr
>WENV170011187
APMI01048538
146914
Alphaproteobacteria
GTG
His
>WENV170011705
APMI01083812
243806
Alphaproteobacteria
CCA
Trp
>WENV170009614
APMI01000906
152510
Alphaproteobacteria
GGG
Pro
>WENV170010123
APMI01009156
237196
Alphaproteobacteria
CGT
Thr
>WENV170009766
APMI01002732
24189
Alphaproteobacteria
CGA
Ser
>WENV170011946
APMI01105935
10642
Alphaproteobacteria
GCT
Ser
>WENV170010502
APMI01018818
144972
Alphaproteobacteria
>WENV170011865
APMI01097779
144972
Alphaproteobacteria
>WENV170010666
APMI01024514
152773
Alphaproteobacteria
GTG
His
>WENV170011806
APMI01092826
25307
Alphaproteobacteria
GGA
Ser
>WENV170010196
APMI01010673
24994
Alphaproteobacteria
GGA
Ser
>WENV170012020
APMI01112069
16380
Alphaproteobacteria
GCT
Ser
>WENV170009869
APMI01004364
240120
Alphaproteobacteria
CTT
Lys
>WENV170011866
APMI01097810
240120
Alphaproteobacteria
CTT
Lys
>WENV170011867
APMI01097810
240120
Alphaproteobacteria
CTT
Lys
>WENV170012286
APMI01146664
339436
Alphaproteobacteria
>WENV170011112
APMI01044153
95936
Alphaproteobacteria
TAA
Leu
>WENV170011452
APMI01066489
95936
Alphaproteobacteria
TAA
Leu
>WENV170012365
APMI01161453
242985
Alphaproteobacteria
GGC
Ala
>WENV170011917
APMI01102546
237571
Alphaproteobacteria
CAT
Met
>WENV170010029
APMI01007009
146927
Alphaproteobacteria
TGG
Pro
>WENV170011905
APMI01100957
146927
Alphaproteobacteria
TGG
Pro
>WENV170010979
APMI01037546
239143
Alphaproteobacteria
CCA
Trp
>WENV170011034
APMI01040610
159404
Alphaproteobacteria
GTG
His
>WENV170012019
APMI01111708
159404
Alphaproteobacteria
GTG
His
>WENV170012375
APMI01164286
159404
Alphaproteobacteria
GTG
His
>WENV170010323
APMI01013794
413302
Alphaproteobacteria
CCC
Gly
>WENV170010966
APMI01036701
339639
Alphaproteobacteria
TTG
Gln
>WENV170010199
APMI01010732
144969
Alphaproteobacteria
CGG
Pro
>WENV170010759
APMI01027941
144969
Alphaproteobacteria
CGG
Pro
>WENV170010250
APMI01011515
146926
Alphaproteobacteria
GTG
His
>WENV170012099
APMI01120135
146926
Alphaproteobacteria
GTG
His
>WENV170010760
APMI01027962
145208
Alphaproteobacteria
CAT
Met
>WENV170011592
APMI01076000
145208
Alphaproteobacteria
CAT
Met
>WENV170012150
APMI01126637
145208
Alphaproteobacteria
CAT
Met
>WENV170012213
APMI01136790
145208
Alphaproteobacteria
CAT
Met
>WENV170012079
APMI01117803
348246
Alphaproteobacteria
>WENV170011224
APMI01050846
236045
Alphaproteobacteria
CGT
Thr
>WENV170009701
APMI01001990
98423
Alphaproteobacteria
CAA
Leu
>WENV170010102
APMI01008512
98423
Alphaproteobacteria
CAA
Leu
>WENV170010854
APMI01031941
95631
Alphaproteobacteria
TAG
Leu
>WENV170009922
APMI01005114
146848
Alphaproteobacteria
GTG
His
>WENV170010353
APMI01014501
146848
Alphaproteobacteria
GTG
His
>WENV170010981
APMI01037681
152034
Alphaproteobacteria
GTC
Asp
>WENV170011846
APMI01096086
237579
Alphaproteobacteria
CTT
Lys
>WENV170011135
APMI01045669
339754
Alphaproteobacteria
GGT
Thr
>WENV170011409
APMI01063947
146915
Alphaproteobacteria
CAT
Met
>WENV170010337
APMI01014236
237439
Alphaproteobacteria
CTT
Lys
>WENV170011284
APMI01053968
237439
Alphaproteobacteria
CTT
Lys
>WENV170012003
APMI01109444
237439
Alphaproteobacteria
CTT
Lys
>WENV170009963
APMI01005934
411617
Alphaproteobacteria
GCA
Cys
>WENV170010248
APMI01011435
237198
Alphaproteobacteria
CGC
Ala
>WENV170010032
APMI01007023
159151
Alphaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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