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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170784338
MCHG01000948
127186
Euryarchaeota
>WENV170784268
MCHG01000302
147813
Euryarchaeota
>WENV170784288
MCHG01000471
339959
Euryarchaeota
>WENV170784373
MCHG01001810
339959
Euryarchaeota
>WENV170784361
MCHG01001279
47393
Euryarchaeota
>WENV170784225
MCHG01000166
127187
Euryarchaeota
>WENV170784252
MCHG01000235
127185
Euryarchaeota
CAT
Met
>WENV170784284
MCHG01000414
127190
Euryarchaeota
CAT
Met
>WENV170784285
MCHG01000414
127190
Euryarchaeota
CAT
Met
>WENV170784339
MCHG01000959
339960
Euryarchaeota
CCC
Gly
>WENV170784242
MCHG01000199
389558
Euryarchaeota
CCG
Arg
>WENV170784195
MCHG01000107
127189
Euryarchaeota
CCT
Arg
>WENV170784197
MCHG01000112
59343
Euryarchaeota
CGA
Ser
>WENV170784226
MCHG01000166
350750
Euryarchaeota
CGT
Thr
>WENV170784214
MCHG01000126
127184
Euryarchaeota
CTC
Glu
>WENV170784280
MCHG01000382
238535
Euryarchaeota
CTG
Gln
>WENV170784217
MCHG01000134
147810
Euryarchaeota
CTT
Lys
>WENV170784272
MCHG01000329
339964
Euryarchaeota
GAA
Phe
>WENV170784228
MCHG01000167
54728
Euryarchaeota
GAG
Leu
>WENV170784229
MCHG01000167
54728
Euryarchaeota
GAG
Leu
>WENV170784245
MCHG01000221
183056
Euryarchaeota
GAT
Ile
>WENV170784246
MCHG01000221
183056
Euryarchaeota
GAT
Ile
>WENV170784273
MCHG01000329
339956
Euryarchaeota
GCC
Gly
>WENV170784275
MCHG01000341
339956
Euryarchaeota
GCC
Gly
>WENV170784369
MCHG01001505
339956
Euryarchaeota
GCC
Gly
>WENV170784360
MCHG01001248
45256
Euryarchaeota
GCT
Ser
>WENV170784227
MCHG01000167
80999
Euryarchaeota
GGA
Ser
>WENV170784247
MCHG01000221
339957
Euryarchaeota
GGC
Ala
>WENV170784243
MCHG01000208
129125
Euryarchaeota
GGG
Pro
>WENV170784351
MCHG01000978
339955
Euryarchaeota
GGT
Thr
>WENV170784230
MCHG01000176
238534
Euryarchaeota
GTC
Asp
>WENV170784251
MCHG01000235
238531
Euryarchaeota
GTT
Asn
>WENV170784253
MCHG01000235
238531
Euryarchaeota
GTT
Asn
>WENV170784244
MCHG01000218
182614
Euryarchaeota
TAC
Val
>WENV170784355
MCHG01001058
182614
Euryarchaeota
TAC
Val
>WENV170784213
MCHG01000126
50437
Euryarchaeota
TAG
Leu
>WENV170784212
MCHG01000126
365831
Euryarchaeota
TCC
Gly
>WENV170784194
MCHG01000107
127188
Euryarchaeota
TCT
Arg
>WENV170784319
MCHG01000783
147809
Euryarchaeota
TGT
Thr
>WENV170784380
MCHG01002275
147809
Euryarchaeota
TGT
Thr
>WENV170784294
MCHG01000494
238533
Euryarchaeota
TTG
Gln
>WENV170784204
MCHG01000114
173325
Euryarchaeota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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