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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170688289
LFRM01237987
300982
Betaproteobacteria
TTT
Lys
>WENV170689449
LFRM01295285
178431
Betaproteobacteria
GAT
Ile
>WENV170691308
LFRM01391677
178431
Betaproteobacteria
GAT
Ile
>WENV170684780
LFRM01058285
236921
Betaproteobacteria
CAT
Met
>WENV170684645
LFRM01050791
208822
Betaproteobacteria
TTG
Gln
>WENV170684610
LFRM01048993
285353
Betaproteobacteria
GCC
Gly
>WENV170687976
LFRM01220536
283193
Betaproteobacteria
CCA
Trp
>WENV170689711
LFRM01308036
22369
Betaproteobacteria
GGA
Ser
>WENV170690869
LFRM01367130
195621
Betaproteobacteria
CAT
Met
>WENV170690640
LFRM01353467
498851
Betaproteobacteria
GCA
Cys
>WENV170686993
LFRM01172640
498851
Betaproteobacteria
GCA
Cys
>WENV170689062
LFRM01275003
207884
Betaproteobacteria
CAT
Met
>WENV170691405
LFRM01395971
207884
Betaproteobacteria
CAT
Met
>WENV170689598
LFRM01303029
283442
Betaproteobacteria
GAA
Phe
>WENV170684588
LFRM01047574
203178
Betaproteobacteria
GAT
Ile
>WENV170684501
LFRM01043215
282862
Betaproteobacteria
TGC
Ala
>WENV170687695
LFRM01205769
194297
Betaproteobacteria
TTG
Gln
>WENV170688950
LFRM01269424
179360
Betaproteobacteria
TTG
Gln
>WENV170686143
LFRM01129040
159239
Betaproteobacteria
ACG
Arg
>WENV170686040
LFRM01123205
159239
Betaproteobacteria
ACG
Arg
>WENV170686039
LFRM01123205
159239
Betaproteobacteria
ACG
Arg
>WENV170684110
LFRM01020247
159239
Betaproteobacteria
ACG
Arg
>WENV170684500
LFRM01043215
176778
Betaproteobacteria
GAT
Ile
>WENV170689839
LFRM01313908
20518
Betaproteobacteria
GGA
Ser
>WENV170684320
LFRM01032174
284936
Betaproteobacteria
CGT
Thr
>WENV170685343
LFRM01086004
284936
Betaproteobacteria
CGT
Thr
>WENV170686992
LFRM01172640
344729
Betaproteobacteria
GCC
Gly
>WENV170686994
LFRM01172640
344729
Betaproteobacteria
GCC
Gly
>WENV170688188
LFRM01232641
237116
Betaproteobacteria
GAT
Ile
>WENV170691655
LFRM01408691
412191
Betaproteobacteria
CCT
Arg
>WENV170686886
LFRM01168648
412191
Betaproteobacteria
CCT
Arg
>WENV170688350
LFRM01241015
120449
Betaproteobacteria
CAA
Leu
>WENV170686183
LFRM01130409
195882
Betaproteobacteria
TTG
Gln
>WENV170691394
LFRM01395287
342112
Betaproteobacteria
GCC
Gly
>WENV170691236
LFRM01387986
282704
Betaproteobacteria
CGC
Ala
>WENV170690621
LFRM01352650
305292
Betaproteobacteria
GAA
Phe
>WENV170688956
LFRM01269945
305292
Betaproteobacteria
GAA
Phe
>WENV170691221
LFRM01386119
283445
Betaproteobacteria
GTT
Asn
>WENV170691222
LFRM01386119
283445
Betaproteobacteria
GTT
Asn
>WENV170684091
LFRM01018953
283445
Betaproteobacteria
GTT
Asn
>WENV170685239
LFRM01080035
283445
Betaproteobacteria
GTT
Asn
>WENV170685240
LFRM01080035
283445
Betaproteobacteria
GTT
Asn
>WENV170685537
LFRM01096975
283445
Betaproteobacteria
GTT
Asn
>WENV170685538
LFRM01096975
283445
Betaproteobacteria
GTT
Asn
>WENV170689314
LFRM01288718
283445
Betaproteobacteria
GTT
Asn
>WENV170684269
LFRM01029960
283018
Betaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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