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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
68 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170684889
LFRM01063560
434494
Euryarchaeota
CCC
Gly
>WENV170691196
LFRM01384362
283854
Euryarchaeota
GTT
Asn
>WENV170684834
LFRM01060395
400781
Euryarchaeota
CGC
Ala
>WENV170685690
LFRM01104515
156310
Euryarchaeota
TCT
Arg
>WENV170685721
LFRM01105597
400782
Euryarchaeota
GAA
Phe
>WENV170690023
LFRM01322134
400782
Euryarchaeota
GAA
Phe
>WENV170690011
LFRM01321466
179046
Euryarchaeota
GCC
Gly
>WENV170683977
LFRM01013243
400785
Euryarchaeota
GCA
Cys
>WENV170685624
LFRM01102032
400785
Euryarchaeota
GCA
Cys
>WENV170687871
LFRM01214605
56523
Euryarchaeota
TAG
Leu
>WENV170684199
LFRM01025938
156308
Euryarchaeota
>WENV170689144
LFRM01279166
58772
Euryarchaeota
>WENV170689145
LFRM01279166
58772
Euryarchaeota
>WENV170688133
LFRM01229339
60569
Euryarchaeota
GGA
Ser
>WENV170683927
LFRM01010453
60569
Euryarchaeota
GGA
Ser
>WENV170690759
LFRM01359875
156312
Euryarchaeota
CAT
Met
>WENV170690620
LFRM01352576
284155
Euryarchaeota
TTG
Gln
>WENV170690758
LFRM01359875
284155
Euryarchaeota
TTG
Gln
>WENV170684749
LFRM01056583
400783
Euryarchaeota
>WENV170686579
LFRM01152659
284153
Euryarchaeota
GTT
Asn
>WENV170686581
LFRM01152659
284153
Euryarchaeota
GTT
Asn
>WENV170690150
LFRM01327109
179051
Euryarchaeota
TGC
Ala
>WENV170684927
LFRM01064322
284157
Euryarchaeota
CTG
Gln
>WENV170686580
LFRM01152659
156306
Euryarchaeota
CAT
Met
>WENV170690022
LFRM01322134
200227
Euryarchaeota
GAC
Val
>WENV170690954
LFRM01372706
420684
Euryarchaeota
>WENV170690953
LFRM01372706
420684
Euryarchaeota
>WENV170685722
LFRM01105597
413253
Euryarchaeota
GCC
Gly
>WENV170686599
LFRM01153609
413253
Euryarchaeota
GCC
Gly
>WENV170690024
LFRM01322134
413253
Euryarchaeota
GCC
Gly
>WENV170691668
LFRM01409766
400780
Euryarchaeota
>WENV170686697
LFRM01159554
400777
Euryarchaeota
>WENV170686130
LFRM01127944
197056
Euryarchaeota
TTT
Lys
>WENV170688454
LFRM01246133
400789
Euryarchaeota
GCC
Gly
>WENV170684770
LFRM01057710
400789
Euryarchaeota
GCC
Gly
>WENV170684473
LFRM01041227
400789
Euryarchaeota
GCC
Gly
>WENV170683870
LFRM01008664
400789
Euryarchaeota
GCC
Gly
>WENV170686601
LFRM01153609
301083
Euryarchaeota
>WENV170684890
LFRM01063560
156307
Euryarchaeota
>WENV170686158
LFRM01129414
77488
Euryarchaeota
TAG
Leu
>WENV170687873
LFRM01214605
156305
Euryarchaeota
CTC
Glu
>WENV170688963
LFRM01270219
156821
Euryarchaeota
CAT
Met
>WENV170688891
LFRM01266632
156821
Euryarchaeota
CAT
Met
>WENV170684841
LFRM01060814
179318
Euryarchaeota
GAT
Ile
>WENV170684842
LFRM01060814
179318
Euryarchaeota
GAT
Ile
>WENV170687869
LFRM01214605
400773
Euryarchaeota
GGT
Thr
>WENV170690957
LFRM01372925
179317
Euryarchaeota
CTT
Lys
>WENV170686600
LFRM01153609
179319
Euryarchaeota
>WENV170687870
LFRM01214605
400784
Euryarchaeota
TCC
Gly
>WENV170684843
LFRM01060814
400775
Euryarchaeota
GGC
Ala
>WENV170689644
LFRM01305096
179316
Euryarchaeota
TGT
Thr
>WENV170685445
LFRM01091679
56525
Euryarchaeota
>WENV170684835
LFRM01060395
156309
Euryarchaeota
TTC
Glu
>WENV170684836
LFRM01060395
156309
Euryarchaeota
TTC
Glu
>WENV170686157
LFRM01129414
156309
Euryarchaeota
TTC
Glu
>WENV170688914
LFRM01268296
77761
Euryarchaeota
GAG
Leu
>WENV170688417
LFRM01243955
152140
Euryarchaeota
TCG
Arg
>WENV170689019
LFRM01272291
284163
Euryarchaeota
GTT
Asn
>WENV170691315
LFRM01392012
284163
Euryarchaeota
GTT
Asn
>WENV170684200
LFRM01025938
411383
Euryarchaeota
CGT
Thr
>WENV170686156
LFRM01129414
179048
Euryarchaeota
CAT
Met
>WENV170689519
LFRM01298634
56528
Euryarchaeota
GCT
Ser
>WENV170684928
LFRM01064322
62477
Euryarchaeota
TAA
Leu
>WENV170688624
LFRM01253971
179321
Euryarchaeota
TTT
Lys
>WENV170689536
LFRM01299509
179321
Euryarchaeota
TTT
Lys
>WENV170683763
LFRM01002916
409957
Euryarchaeota
GCG
Arg
>WENV170685691
LFRM01104515
156311
Euryarchaeota
CCT
Arg
>WENV170689642
LFRM01305096
195775
Euryarchaeota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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