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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170784225
MCHG01000166
156308
Euryarchaeota
>WENV170784228
MCHG01000167
58594
Euryarchaeota
>WENV170784229
MCHG01000167
58594
Euryarchaeota
>WENV170784288
MCHG01000471
400777
Euryarchaeota
>WENV170784373
MCHG01001810
400777
Euryarchaeota
>WENV170784338
MCHG01000948
156307
Euryarchaeota
>WENV170784244
MCHG01000218
179319
Euryarchaeota
>WENV170784355
MCHG01001058
179319
Euryarchaeota
>WENV170784268
MCHG01000302
211758
Euryarchaeota
CAC
Val
>WENV170784284
MCHG01000414
156312
Euryarchaeota
CAT
Met
>WENV170784285
MCHG01000414
156312
Euryarchaeota
CAT
Met
>WENV170784252
MCHG01000235
156306
Euryarchaeota
CAT
Met
>WENV170784339
MCHG01000959
434494
Euryarchaeota
CCC
Gly
>WENV170784242
MCHG01000199
455523
Euryarchaeota
CCG
Arg
>WENV170784195
MCHG01000107
160996
Euryarchaeota
CCT
Arg
>WENV170784197
MCHG01000112
73700
Euryarchaeota
CGA
Ser
>WENV170784214
MCHG01000126
156305
Euryarchaeota
CTC
Glu
>WENV170784280
MCHG01000382
284157
Euryarchaeota
CTG
Gln
>WENV170784272
MCHG01000329
400782
Euryarchaeota
GAA
Phe
>WENV170784245
MCHG01000221
179318
Euryarchaeota
GAT
Ile
>WENV170784246
MCHG01000221
179318
Euryarchaeota
GAT
Ile
>WENV170784273
MCHG01000329
400774
Euryarchaeota
GCC
Gly
>WENV170784275
MCHG01000341
400774
Euryarchaeota
GCC
Gly
>WENV170784369
MCHG01001505
400774
Euryarchaeota
GCC
Gly
>WENV170784360
MCHG01001248
60668
Euryarchaeota
GCT
Ser
>WENV170784227
MCHG01000167
106791
Euryarchaeota
GGA
Ser
>WENV170784247
MCHG01000221
400775
Euryarchaeota
GGC
Ala
>WENV170784243
MCHG01000208
158452
Euryarchaeota
GGG
Pro
>WENV170784351
MCHG01000978
400773
Euryarchaeota
GGT
Thr
>WENV170784230
MCHG01000176
284156
Euryarchaeota
GTC
Asp
>WENV170784251
MCHG01000235
284153
Euryarchaeota
GTT
Asn
>WENV170784253
MCHG01000235
284153
Euryarchaeota
GTT
Asn
>WENV170784299
MCHG01000554
56521
Euryarchaeota
TAA
Leu
>WENV170784213
MCHG01000126
56523
Euryarchaeota
TAG
Leu
>WENV170784212
MCHG01000126
400784
Euryarchaeota
TCC
Gly
>WENV170784194
MCHG01000107
156310
Euryarchaeota
TCT
Arg
>WENV170784380
MCHG01002275
179316
Euryarchaeota
TGT
Thr
>WENV170784294
MCHG01000494
284155
Euryarchaeota
TTG
Gln
>WENV170784204
MCHG01000114
179315
Euryarchaeota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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