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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
296 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183566743
OOCB01000001
240017
Bacillota
GCC
Gly
>WENV183566742
OOCB01000001
263765
Bacillota
TAC
Val
>WENV183566779
OOCB01000008
399137
Bacillota
GCC
Gly
>WENV183566784
OOCB01000009
338147
Bacillota
CTC
Glu
>WENV183566783
OOCB01000009
338147
Bacillota
CTC
Glu
>WENV183566782
OOCB01000009
338147
Bacillota
CTC
Glu
>WENV183566812
OOCB01000017
434167
Bacillota
TCC
Gly
>WENV183566815
OOCB01000019
411547
Bacillota
CTG
Gln
>WENV183566816
OOCB01000020
152492
Bacillota
GGG
Pro
>WENV183566829
OOCB01000026
411547
Bacillota
CTG
Gln
>WENV183566838
OOCB01000031
85019
Bacillota
GAG
Leu
>WENV183566896
OOCB01000050
196621
Bacillota
GTC
Asp
>WENV183566898
OOCB01000050
44854
Bacillota
TGA
Ser
>WENV183566891
OOCB01000050
338149
Bacillota
CTC
Glu
>WENV183566899
OOCB01000050
4624
Bacillota
GCT
Ser
>WENV183566897
OOCB01000050
235095
Bacillota
GGT
Thr
>WENV183566895
OOCB01000050
235095
Bacillota
GGT
Thr
>WENV183566894
OOCB01000050
235095
Bacillota
GGT
Thr
>WENV183566892
OOCB01000050
144621
Bacillota
GTT
Asn
>WENV183566917
OOCB01000057
434167
Bacillota
TCC
Gly
>WENV183566919
OOCB01000062
344240
Bacillota
GCC
Gly
>WENV183566922
OOCB01000062
196632
Bacillota
GTC
Asp
>WENV183566918
OOCB01000062
196632
Bacillota
GTC
Asp
>WENV183566923
OOCB01000062
245344
Bacillota
GAA
Phe
>WENV183566958
OOCB01000084
271471
Bacillota
GCC
Gly
>WENV183566991
OOCB01000107
271471
Bacillota
GCC
Gly
>WENV183567005
OOCB01000116
147684
Bacillota
ACG
Arg
>WENV183567048
OOCB01000148
263765
Bacillota
TAC
Val
>WENV183567099
OOCB01000170
344240
Bacillota
GCC
Gly
>WENV183567121
OOCB01000185
37071
Bacillota
TGA
Ser
>WENV183567118
OOCB01000185
235113
Bacillota
GAA
Phe
>WENV183567128
OOCB01000190
148239
Bacillota
TCT
Arg
>WENV183567129
OOCB01000190
156937
Bacillota
GTG
His
>WENV183567143
OOCB01000200
277200
Bacillota
GGC
Ala
>WENV183567161
OOCB01000216
154063
Bacillota
CGG
Pro
>WENV183567168
OOCB01000221
338152
Bacillota
TTC
Glu
>WENV183567169
OOCB01000221
241432
Bacillota
TGT
Thr
>WENV183567183
OOCB01000238
293599
Bacillota
CTT
Lys
>WENV183567208
OOCB01000276
235142
Bacillota
CTT
Lys
>WENV183567217
OOCB01000282
245296
Bacillota
CCC
Gly
>WENV183567246
OOCB01000315
157838
Bacillota
GTC
Asp
>WENV183567259
OOCB01000318
148188
Bacillota
CCG
Arg
>WENV183567258
OOCB01000318
338128
Bacillota
TTC
Glu
>WENV183567264
OOCB01000322
304022
Bacillota
GCC
Gly
>WENV183567263
OOCB01000322
235079
Bacillota
GAA
Phe
>WENV183567282
OOCB01000332
256380
Bacillota
>WENV183567346
OOCB01000395
169968
Bacillota
CAT
Met
>WENV183567351
OOCB01000399
11034
Bacillota
GGA
Ser
>WENV183567350
OOCB01000399
338129
Bacillota
TGT
Thr
>WENV183567357
OOCB01000409
144612
Bacillota
TCT
Arg
>WENV183567360
OOCB01000411
144621
Bacillota
GTT
Asn
>WENV183567400
OOCB01000460
274189
Bacillota
TGT
Thr
>WENV183567404
OOCB01000463
148188
Bacillota
CCG
Arg
>WENV183567406
OOCB01000463
338128
Bacillota
TTC
Glu
>WENV183567415
OOCB01000478
304022
Bacillota
GCC
Gly
>WENV183567424
OOCB01000485
243098
Bacillota
GGT
Thr
>WENV183567439
OOCB01000494
58712
Bacillota
CAG
Leu
>WENV183567443
OOCB01000501
338147
Bacillota
CTC
Glu
>WENV183567444
OOCB01000502
263765
Bacillota
TAC
Val
>WENV183567454
OOCB01000511
338152
Bacillota
TTC
Glu
>WENV183567453
OOCB01000511
287000
Bacillota
GTT
Asn
>WENV183567456
OOCB01000515
313454
Bacillota
GAA
Phe
>WENV183567487
OOCB01000543
419639
Bacillota
GCA
Cys
>WENV183567486
OOCB01000543
344240
Bacillota
GCC
Gly
>WENV183567490
OOCB01000545
245296
Bacillota
CCC
Gly
>WENV183567493
OOCB01000550
411549
Bacillota
TTG
Gln
>WENV183567498
OOCB01000556
235171
Bacillota
CCA
Trp
>WENV183567508
OOCB01000566
304022
Bacillota
GCC
Gly
>WENV183567509
OOCB01000569
267649
Bacillota
TAC
Val
>WENV183567520
OOCB01000580
238974
Bacillota
GAA
Phe
>WENV183567521
OOCB01000581
95563
Bacillota
GTA
Tyr
>WENV183567524
OOCB01000587
411547
Bacillota
CTG
Gln
>WENV183567537
OOCB01000599
304022
Bacillota
GCC
Gly
>WENV183567538
OOCB01000600
338129
Bacillota
TGT
Thr
>WENV183567539
OOCB01000604
235154
Bacillota
GTT
Asn
>WENV183567544
OOCB01000613
59312
Bacillota
CAG
Leu
>WENV183567549
OOCB01000619
338152
Bacillota
TTC
Glu
>WENV183567567
OOCB01000648
100326
Bacillota
GTA
Tyr
>WENV183567577
OOCB01000665
313454
Bacillota
GAA
Phe
>WENV183567585
OOCB01000679
302150
Bacillota
TAC
Val
>WENV183567589
OOCB01000681
144621
Bacillota
GTT
Asn
>WENV183567603
OOCB01000710
429429
Bacillota
CCA
Trp
>WENV183567626
OOCB01000738
238974
Bacillota
GAA
Phe
>WENV183567638
OOCB01000749
245298
Bacillota
CGG
Pro
>WENV183567637
OOCB01000749
411547
Bacillota
CTG
Gln
>WENV183567644
OOCB01000755
304022
Bacillota
GCC
Gly
>WENV183567649
OOCB01000757
245298
Bacillota
CGG
Pro
>WENV183567648
OOCB01000757
411547
Bacillota
CTG
Gln
>WENV183567647
OOCB01000757
235124
Bacillota
TGG
Pro
>WENV183567661
OOCB01000782
340802
Bacillota
TTG
Gln
>WENV183567660
OOCB01000782
144610
Bacillota
GTG
His
>WENV183567659
OOCB01000782
157635
Bacillota
TCT
Arg
>WENV183567686
OOCB01000817
263765
Bacillota
TAC
Val
>WENV183567710
OOCB01000858
11034
Bacillota
GGA
Ser
>WENV183567714
OOCB01000876
338149
Bacillota
CTC
Glu
>WENV183567715
OOCB01000876
144621
Bacillota
GTT
Asn
>WENV183567729
OOCB01000914
313454
Bacillota
GAA
Phe
>WENV183567745
OOCB01000931
307003
Bacillota
TGC
Ala
>WENV183567747
OOCB01000940
245296
Bacillota
CCC
Gly
>WENV183567754
OOCB01000950
59312
Bacillota
CAG
Leu
>WENV183567753
OOCB01000950
44859
Bacillota
AAG
Leu
>WENV183567752
OOCB01000950
44859
Bacillota
AAG
Leu
>WENV183567767
OOCB01000998
44854
Bacillota
TGA
Ser
>WENV183567768
OOCB01000998
4624
Bacillota
GCT
Ser
>WENV183567771
OOCB01001005
162445
Bacillota
CAT
Met
>WENV183567791
OOCB01001053
148188
Bacillota
CCG
Arg
>WENV183567810
OOCB01001122
235098
Bacillota
GAC
Val
>WENV183567811
OOCB01001122
144594
Bacillota
CAC
Val
>WENV183567816
OOCB01001135
338149
Bacillota
CTC
Glu
>WENV183567817
OOCB01001135
144621
Bacillota
GTT
Asn
>WENV183567815
OOCB01001135
272992
Bacillota
CTT
Lys
>WENV183567820
OOCB01001146
148188
Bacillota
CCG
Arg
>WENV183567822
OOCB01001152
309417
Bacillota
GGC
Ala
>WENV183567824
OOCB01001157
58712
Bacillota
CAG
Leu
>WENV183567833
OOCB01001169
41154
Bacillota
TAA
Leu
>WENV183567834
OOCB01001169
147684
Bacillota
ACG
Arg
>WENV183567848
OOCB01001208
429429
Bacillota
CCA
Trp
>WENV183567850
OOCB01001215
37269
Bacillota
TGA
Ser
>WENV183567862
OOCB01001268
267649
Bacillota
TAC
Val
>WENV183567870
OOCB01001295
263765
Bacillota
TAC
Val
>WENV183567878
OOCB01001308
411549
Bacillota
TTG
Gln
>WENV183567891
OOCB01001336
37269
Bacillota
TGA
Ser
>WENV183567906
OOCB01001387
248965
Bacillota
GCC
Gly
>WENV183567915
OOCB01001415
144610
Bacillota
GTG
His
>WENV183567933
OOCB01001443
144583
Bacillota
ACG
Arg
>WENV183567961
OOCB01001509
144612
Bacillota
TCT
Arg
>WENV183567973
OOCB01001532
434167
Bacillota
TCC
Gly
>WENV183567995
OOCB01001618
429429
Bacillota
CCA
Trp
>WENV183568004
OOCB01001663
235098
Bacillota
GAC
Val
>WENV183568005
OOCB01001673
241432
Bacillota
TGT
Thr
>WENV183568012
OOCB01001674
263765
Bacillota
TAC
Val
>WENV183568016
OOCB01001678
235095
Bacillota
GGT
Thr
>WENV183568036
OOCB01001742
304022
Bacillota
GCC
Gly
>WENV183568039
OOCB01001755
304022
Bacillota
GCC
Gly
>WENV183568044
OOCB01001771
21693
Bacillota
GCT
Ser
>WENV183568069
OOCB01001872
235124
Bacillota
TGG
Pro
>WENV183568093
OOCB01001931
235124
Bacillota
TGG
Pro
>WENV183568106
OOCB01001966
11034
Bacillota
GGA
Ser
>WENV183568123
OOCB01001997
144610
Bacillota
GTG
His
>WENV183568128
OOCB01002017
238974
Bacillota
GAA
Phe
>WENV183568131
OOCB01002037
235098
Bacillota
GAC
Val
>WENV183568133
OOCB01002049
235142
Bacillota
CTT
Lys
>WENV183568149
OOCB01002099
114075
Bacillota
TAG
Leu
>WENV183568160
OOCB01002151
235098
Bacillota
GAC
Val
>WENV183568197
OOCB01002290
238974
Bacillota
GAA
Phe
>WENV183568199
OOCB01002298
235095
Bacillota
GGT
Thr
>WENV183568202
OOCB01002310
338147
Bacillota
CTC
Glu
>WENV183568212
OOCB01002350
144612
Bacillota
TCT
Arg
>WENV183568223
OOCB01002385
245298
Bacillota
CGG
Pro
>WENV183568222
OOCB01002385
411547
Bacillota
CTG
Gln
>WENV183568224
OOCB01002385
411549
Bacillota
TTG
Gln
>WENV183568227
OOCB01002419
235171
Bacillota
CCA
Trp
>WENV183568228
OOCB01002420
238910
Bacillota
CTT
Lys
>WENV183568243
OOCB01002460
313454
Bacillota
GAA
Phe
>WENV183568246
OOCB01002480
144621
Bacillota
GTT
Asn
>WENV183568260
OOCB01002578
154063
Bacillota
CGG
Pro
>WENV183568267
OOCB01002585
156937
Bacillota
GTG
His
>WENV183568280
OOCB01002656
338147
Bacillota
CTC
Glu
>WENV183568287
OOCB01002689
338128
Bacillota
TTC
Glu
>WENV183568293
OOCB01002707
144612
Bacillota
TCT
Arg
>WENV183568299
OOCB01002737
37213
Bacillota
TGA
Ser
>WENV183568305
OOCB01002794
434167
Bacillota
TCC
Gly
>WENV183568306
OOCB01002800
338129
Bacillota
TGT
Thr
>WENV183568310
OOCB01002823
338129
Bacillota
TGT
Thr
>WENV183568324
OOCB01002885
235098
Bacillota
GAC
Val
>WENV183568327
OOCB01002893
298639
Bacillota
GTT
Asn
>WENV183568332
OOCB01002898
411549
Bacillota
TTG
Gln
>WENV183568350
OOCB01003008
235098
Bacillota
GAC
Val
>WENV183568352
OOCB01003044
157838
Bacillota
GTC
Asp
>WENV183568354
OOCB01003053
235095
Bacillota
GGT
Thr
>WENV183568408
OOCB01003223
238910
Bacillota
CTT
Lys
>WENV183568419
OOCB01003302
44854
Bacillota
TGA
Ser
>WENV183568420
OOCB01003302
4624
Bacillota
GCT
Ser
>WENV183568443
OOCB01003367
58712
Bacillota
CAG
Leu
>WENV183568446
OOCB01003388
411547
Bacillota
CTG
Gln
>WENV183568458
OOCB01003531
338128
Bacillota
TTC
Glu
>WENV183568466
OOCB01003600
154063
Bacillota
CGG
Pro
>WENV183568505
OOCB01003796
245298
Bacillota
CGG
Pro
>WENV183568504
OOCB01003796
411547
Bacillota
CTG
Gln
>WENV183568513
OOCB01003876
148188
Bacillota
CCG
Arg
>WENV183568529
OOCB01004024
235134
Bacillota
GAA
Phe
>WENV183568541
OOCB01004108
156937
Bacillota
GTG
His
>WENV183568540
OOCB01004108
152151
Bacillota
TCT
Arg
>WENV183568545
OOCB01004127
198770
Bacillota
GTC
Asp
>WENV183568549
OOCB01004166
235134
Bacillota
GAA
Phe
>WENV183568580
OOCB01004382
309417
Bacillota
GGC
Ala
>WENV183568591
OOCB01004556
157838
Bacillota
GTC
Asp
>WENV183568623
OOCB01004871
144612
Bacillota
TCT
Arg
>WENV183568659
OOCB01005196
155273
Bacillota
CAT
Met
>WENV183568671
OOCB01005337
338128
Bacillota
TTC
Glu
>WENV183568685
OOCB01005485
302150
Bacillota
TAC
Val
>WENV183568691
OOCB01005610
241441
Bacillota
GCC
Gly
>WENV183568697
OOCB01005689
21693
Bacillota
GCT
Ser
>WENV183568717
OOCB01006044
338149
Bacillota
CTC
Glu
>WENV183568718
OOCB01006044
144621
Bacillota
GTT
Asn
>WENV183568736
OOCB01006175
144652
Bacillota
GTC
Asp
>WENV183568748
OOCB01006360
162445
Bacillota
CAT
Met
>WENV183568749
OOCB01006365
235095
Bacillota
GGT
Thr
>WENV183568760
OOCB01006604
157635
Bacillota
TCT
Arg
>WENV183568765
OOCB01006614
313454
Bacillota
GAA
Phe
>WENV183568764
OOCB01006614
169968
Bacillota
CAT
Met
>WENV183568774
OOCB01006684
196621
Bacillota
GTC
Asp
>WENV183568775
OOCB01006684
304022
Bacillota
GCC
Gly
>WENV183568773
OOCB01006684
304022
Bacillota
GCC
Gly
>WENV183568772
OOCB01006684
235079
Bacillota
GAA
Phe
>WENV183568777
OOCB01006734
235124
Bacillota
TGG
Pro
>WENV183568783
OOCB01006872
245296
Bacillota
CCC
Gly
>WENV183568787
OOCB01006963
298620
Bacillota
CAT
Met
>WENV183568793
OOCB01006966
409574
Bacillota
TGT
Thr
>WENV183568788
OOCB01006966
235294
Bacillota
TGC
Ala
>WENV183568796
OOCB01006966
338208
Bacillota
>WENV183568795
OOCB01006966
116350
Bacillota
TAG
Leu
>WENV183568789
OOCB01006966
411584
Bacillota
TCC
Gly
>WENV183568790
OOCB01006966
313104
Bacillota
TAC
Val
>WENV183568792
OOCB01006966
235289
Bacillota
GTT
Asn
>WENV183568801
OOCB01007128
411547
Bacillota
CTG
Gln
>WENV183568823
OOCB01007499
44854
Bacillota
TGA
Ser
>WENV183568824
OOCB01007499
4624
Bacillota
GCT
Ser
>WENV183568827
OOCB01007520
411547
Bacillota
CTG
Gln
>WENV183568831
OOCB01007620
202812
Bacillota
CAT
Met
>WENV183568859
OOCB01008088
429429
Bacillota
CCA
Trp
>WENV183568862
OOCB01008189
340802
Bacillota
TTG
Gln
>WENV183568901
OOCB01008973
202812
Bacillota
CAT
Met
>WENV183568917
OOCB01009430
309417
Bacillota
GGC
Ala
>WENV183568936
OOCB01009803
338129
Bacillota
TGT
Thr
>WENV183568939
OOCB01009837
152492
Bacillota
GGG
Pro
>WENV183568949
OOCB01010094
235098
Bacillota
GAC
Val
>WENV183568961
OOCB01010361
144610
Bacillota
GTG
His
>WENV183569004
OOCB01011600
414486
Bacillota
CCC
Gly
>WENV183569007
OOCB01011614
235117
Bacillota
TAC
Val
>WENV183569013
OOCB01011816
412387
Bacillota
GCA
Cys
>WENV183569017
OOCB01011933
256380
Bacillota
>WENV183569018
OOCB01011962
302150
Bacillota
TAC
Val
>WENV183569026
OOCB01012115
147684
Bacillota
ACG
Arg
>WENV183569062
OOCB01013615
307003
Bacillota
TGC
Ala
>WENV183569065
OOCB01013701
307003
Bacillota
TGC
Ala
>WENV183569080
OOCB01014185
11034
Bacillota
GGA
Ser
>WENV183569091
OOCB01014892
235506
Bacillota
TGC
Ala
>WENV183569094
OOCB01014975
196621
Bacillota
GTC
Asp
>WENV183569095
OOCB01014975
235095
Bacillota
GGT
Thr
>WENV183569093
OOCB01014975
235171
Bacillota
CCA
Trp
>WENV183569097
OOCB01015257
247734
Bacillota
TGC
Ala
>WENV183569102
OOCB01015434
198135
Bacillota
GAT
Ile
>WENV183569105
OOCB01015675
144610
Bacillota
GTG
His
>WENV183569125
OOCB01016203
338131
Bacillota
GCC
Gly
>WENV183569137
OOCB01016767
313164
Bacillota
TTT
Lys
>WENV183569138
OOCB01016784
162445
Bacillota
CAT
Met
>WENV183569145
OOCB01017092
155089
Bacillota
CAT
Met
>WENV183569152
OOCB01017392
411549
Bacillota
TTG
Gln
>WENV183569159
OOCB01017708
413152
Bacillota
TCC
Gly
>WENV183569170
OOCB01017987
152492
Bacillota
GGG
Pro
>WENV183569182
OOCB01018838
100326
Bacillota
GTA
Tyr
>WENV183569200
OOCB01019785
144583
Bacillota
ACG
Arg
>WENV183569201
OOCB01019874
299139
Bacillota
TGC
Ala
>WENV183569210
OOCB01020055
304022
Bacillota
GCC
Gly
>WENV183569218
OOCB01020548
274189
Bacillota
TGT
Thr
>WENV183569232
OOCB01021253
144594
Bacillota
CAC
Val
>WENV183569236
OOCB01021681
302150
Bacillota
TAC
Val
>WENV183569235
OOCB01021681
144599
Bacillota
GTC
Asp
>WENV183569239
OOCB01021755
153911
Bacillota
GAT
Ile
>WENV183569243
OOCB01022143
412387
Bacillota
GCA
Cys
>WENV183569247
OOCB01022385
144672
Bacillota
TCT
Arg
>WENV183569256
OOCB01022939
144610
Bacillota
GTG
His
>WENV183569275
OOCB01024372
235095
Bacillota
GGT
Thr
>WENV183569279
OOCB01025557
272992
Bacillota
CTT
Lys
>WENV183569282
OOCB01025723
235117
Bacillota
TAC
Val
>WENV183569293
OOCB01027375
37269
Bacillota
TGA
Ser
>WENV183569297
OOCB01027638
316443
Bacillota
GTC
Asp
>WENV183569299
OOCB01027638
113225
Bacillota
TAG
Leu
>WENV183569314
OOCB01027687
413152
Bacillota
TCC
Gly
>WENV183569323
OOCB01028449
338149
Bacillota
CTC
Glu
>WENV183569340
OOCB01029751
313164
Bacillota
TTT
Lys
>WENV183569353
OOCB01031255
235150
Bacillota
TGC
Ala
>WENV183569362
OOCB01033131
429429
Bacillota
CCA
Trp
>WENV183569366
OOCB01033548
148188
Bacillota
CCG
Arg
>WENV183569372
OOCB01034762
201704
Bacillota
GAT
Ile
>WENV183569386
OOCB01037495
413152
Bacillota
TCC
Gly
>WENV183569395
OOCB01039401
235150
Bacillota
TGC
Ala
>WENV183569419
OOCB01043098
162445
Bacillota
CAT
Met
>WENV183569432
OOCB01045759
411549
Bacillota
TTG
Gln
>WENV183569457
OOCB01052705
235150
Bacillota
TGC
Ala
>WENV183569473
OOCB01055944
237387
Bacillota
TGT
Thr
>WENV183569478
OOCB01055944
162028
Bacillota
ACG
Arg
>WENV183569477
OOCB01055944
37193
Bacillota
TAA
Leu
>WENV183569500
OOCB01062146
235150
Bacillota
TGC
Ala
>WENV183569506
OOCB01062226
302150
Bacillota
TAC
Val
>WENV183569505
OOCB01062226
144599
Bacillota
GTC
Asp
>WENV183569523
OOCB01068628
339890
Bacillota
TTG
Gln
>WENV183569524
OOCB01068628
235127
Bacillota
TTT
Lys
>WENV183569532
OOCB01070420
235287
Bacillota
TTT
Lys
>WENV183569530
OOCB01070420
144763
Bacillota
TGG
Pro
>WENV183569535
OOCB01070420
144766
Bacillota
CAT
Met
>WENV183569531
OOCB01070420
144767
Bacillota
GTG
His
>WENV183569581
OOCB01084625
235638
Bacillota
GAA
Phe
>WENV183569590
OOCB01088929
235137
Bacillota
TGC
Ala
>WENV183569633
OOCB01102961
263523
Bacillota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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