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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170577874
FSSH01002270
259737
Alphaproteobacteria
GAA
Phe
>WENV170577763
FSSH01000913
369662
Alphaproteobacteria
GGT
Thr
>WENV170578003
FSSH01005558
271426
Alphaproteobacteria
CGT
Thr
>WENV170577803
FSSH01001365
114361
Alphaproteobacteria
GTA
Tyr
>WENV170577814
FSSH01001557
160383
Alphaproteobacteria
CCG
Arg
>WENV170577965
FSSH01003969
290709
Alphaproteobacteria
CCA
Trp
>WENV170577767
FSSH01000954
261051
Alphaproteobacteria
CGC
Ala
>WENV170577602
FSSH01000257
39753
Alphaproteobacteria
TGA
Ser
>WENV170577512
FSSH01000103
65349
Alphaproteobacteria
GTA
Tyr
>WENV170577532
FSSH01000122
396032
Alphaproteobacteria
TTG
Gln
>WENV170578064
FSSH01009224
27419
Alphaproteobacteria
GGA
Ser
>WENV170577565
FSSH01000205
278164
Alphaproteobacteria
>WENV170577459
FSSH01000026
310324
Alphaproteobacteria
TTT
Lys
>WENV170578006
FSSH01005656
257580
Alphaproteobacteria
CTT
Lys
>WENV170577460
FSSH01000026
66417
Alphaproteobacteria
GAG
Leu
>WENV170577475
FSSH01000044
66417
Alphaproteobacteria
GAG
Leu
>WENV170577979
FSSH01004483
66417
Alphaproteobacteria
GAG
Leu
>WENV170577788
FSSH01001195
195114
Alphaproteobacteria
CGG
Pro
>WENV170577490
FSSH01000065
216002
Alphaproteobacteria
CCG
Arg
>WENV170578010
FSSH01005841
382620
Alphaproteobacteria
GCC
Gly
>WENV170577898
FSSH01002526
106863
Alphaproteobacteria
TAG
Leu
>WENV170577927
FSSH01003261
210925
Alphaproteobacteria
TCT
Arg
>WENV170578091
FSSH01015013
395582
Alphaproteobacteria
CTC
Glu
>WENV170577557
FSSH01000179
27695
Alphaproteobacteria
TGA
Ser
>WENV170577875
FSSH01002270
375074
Alphaproteobacteria
GGT
Thr
>WENV170577978
FSSH01004481
290879
Alphaproteobacteria
GAA
Phe
>WENV170577805
FSSH01001392
461210
Alphaproteobacteria
CTG
Gln
>WENV170577468
FSSH01000037
160317
Alphaproteobacteria
CCA
Trp
>WENV170577467
FSSH01000037
370792
Alphaproteobacteria
CTC
Glu
>WENV170577556
FSSH01000179
161642
Alphaproteobacteria
CAT
Met
>WENV170577770
FSSH01000989
105299
Alphaproteobacteria
CAA
Leu
>WENV170577812
FSSH01001522
371080
Alphaproteobacteria
CTC
Glu
>WENV170578069
FSSH01009873
161641
Alphaproteobacteria
CGG
Pro
>WENV170577916
FSSH01002901
477820
Alphaproteobacteria
CCC
Gly
>WENV170578084
FSSH01012864
108406
Alphaproteobacteria
TAG
Leu
>WENV170577725
FSSH01000631
165995
Alphaproteobacteria
GTC
Asp
>WENV170577720
FSSH01000595
160734
Alphaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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