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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170577466
FSSH01000037
108283
Alphaproteobacteria
CAA
Leu
>WENV170577490
FSSH01000065
151730
Alphaproteobacteria
CCG
Arg
>WENV170577492
FSSH01000075
108283
Alphaproteobacteria
CAA
Leu
>WENV170577532
FSSH01000122
352138
Alphaproteobacteria
TTG
Gln
>WENV170577557
FSSH01000179
31506
Alphaproteobacteria
TGA
Ser
>WENV170577558
FSSH01000179
237574
Alphaproteobacteria
TGT
Thr
>WENV170577570
FSSH01000208
417658
Alphaproteobacteria
TCC
Gly
>WENV170577603
FSSH01000257
268154
Alphaproteobacteria
TGT
Thr
>WENV170577602
FSSH01000257
31506
Alphaproteobacteria
TGA
Ser
>WENV170577605
FSSH01000258
236134
Alphaproteobacteria
TAC
Val
>WENV170577631
FSSH01000316
236134
Alphaproteobacteria
TAC
Val
>WENV170577671
FSSH01000509
417658
Alphaproteobacteria
TCC
Gly
>WENV170577720
FSSH01000595
182651
Alphaproteobacteria
GTC
Asp
>WENV170577725
FSSH01000631
146852
Alphaproteobacteria
GTC
Asp
>WENV170577730
FSSH01000643
152773
Alphaproteobacteria
GTG
His
>WENV170577751
FSSH01000778
159476
Alphaproteobacteria
ACG
Arg
>WENV170577750
FSSH01000778
257056
Alphaproteobacteria
CGT
Thr
>WENV170577754
FSSH01000838
237281
Alphaproteobacteria
CGT
Thr
>WENV170577763
FSSH01000913
339465
Alphaproteobacteria
GGT
Thr
>WENV170577767
FSSH01000954
237580
Alphaproteobacteria
CGC
Ala
>WENV170577769
FSSH01000988
268154
Alphaproteobacteria
TGT
Thr
>WENV170577770
FSSH01000989
95925
Alphaproteobacteria
CAA
Leu
>WENV170577803
FSSH01001365
95946
Alphaproteobacteria
GTA
Tyr
>WENV170577813
FSSH01001534
109113
Alphaproteobacteria
CAG
Leu
>WENV170577814
FSSH01001557
155663
Alphaproteobacteria
CCG
Arg
>WENV170577825
FSSH01001676
29390
Alphaproteobacteria
CGA
Ser
>WENV170577875
FSSH01002270
345454
Alphaproteobacteria
GGT
Thr
>WENV170577898
FSSH01002526
96202
Alphaproteobacteria
TAG
Leu
>WENV170577904
FSSH01002529
126988
Alphaproteobacteria
GGG
Pro
>WENV170577915
FSSH01002675
417658
Alphaproteobacteria
TCC
Gly
>WENV170577916
FSSH01002901
417751
Alphaproteobacteria
>WENV170577917
FSSH01002949
339516
Alphaproteobacteria
CAC
Val
>WENV170577945
FSSH01003488
108283
Alphaproteobacteria
CAA
Leu
>WENV170577978
FSSH01004481
254595
Alphaproteobacteria
GAA
Phe
>WENV170578001
FSSH01005544
236134
Alphaproteobacteria
TAC
Val
>WENV170578006
FSSH01005656
237579
Alphaproteobacteria
CTT
Lys
>WENV170578010
FSSH01005841
364533
Alphaproteobacteria
GCC
Gly
>WENV170578016
FSSH01006049
268154
Alphaproteobacteria
TGT
Thr
>WENV170578017
FSSH01006050
268154
Alphaproteobacteria
TGT
Thr
>WENV170578029
FSSH01006825
236134
Alphaproteobacteria
TAC
Val
>WENV170578064
FSSH01009224
27392
Alphaproteobacteria
GGA
Ser
>WENV170578070
FSSH01009874
412181
Alphaproteobacteria
CTG
Gln
>WENV170578091
FSSH01015013
385404
Alphaproteobacteria
CTC
Glu
>WENV170578095
FSSH01016462
236134
Alphaproteobacteria
TAC
Val
>WENV170578133
FSSH01030322
237479
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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