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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170680837
LFEF01026503
452090
Cyanobacteriota
GTG
His
>WENV170680736
LFEF01015971
782791
Cyanobacteriota
TCC
Gly
>WENV170680616
LFEF01003422
452091
Cyanobacteriota
GGC
Ala
>WENV170680846
LFEF01027678
112327
Cyanobacteriota
CAG
Leu
>WENV170680617
LFEF01003422
452088
Cyanobacteriota
TTG
Gln
>WENV170680756
LFEF01018863
271065
Cyanobacteriota
CCT
Arg
>WENV170681015
LFEF01043746
653705
Cyanobacteriota
TAC
Val
>WENV170680737
LFEF01016128
5729
Cyanobacteriota
GCT
Ser
>WENV170680847
LFEF01027753
779546
Cyanobacteriota
GCA
Cys
>WENV170680595
LFEF01001757
653701
Cyanobacteriota
GTT
Asn
>WENV170680781
LFEF01022258
180036
Cyanobacteriota
GTA
Tyr
>WENV170680660
LFEF01008260
271066
Cyanobacteriota
TGG
Pro
>WENV170680921
LFEF01034518
653706
Cyanobacteriota
GCC
Gly
>WENV170681018
LFEF01044014
86922
Cyanobacteriota
CAA
Leu
>WENV170681019
LFEF01044014
452093
Cyanobacteriota
TCT
Arg
>WENV170681042
LFEF01046022
653700
Cyanobacteriota
CCC
Gly
>WENV170680583
LFEF01000100
452095
Cyanobacteriota
CCA
Trp
>WENV170680586
LFEF01000589
653699
Cyanobacteriota
TGT
Thr
>WENV170680693
LFEF01011077
271061
Cyanobacteriota
GGG
Pro
>WENV170680920
LFEF01034518
45725
Cyanobacteriota
GGA
Ser
>WENV170680699
LFEF01011400
452094
Cyanobacteriota
GAA
Phe
>WENV170680719
LFEF01014127
653702
Cyanobacteriota
CGT
Thr
>WENV170680967
LFEF01039373
180035
Cyanobacteriota
GAG
Leu
>WENV170680642
LFEF01006723
480622
Cyanobacteriota
CAT
Met
>WENV170680615
LFEF01003422
271067
Cyanobacteriota
CAT
Met
>WENV170680783
LFEF01022258
271336
Cyanobacteriota
CAT
Met
>WENV170680782
LFEF01022258
653703
Cyanobacteriota
GGT
Thr
>WENV170681014
LFEF01043494
279234
Cyanobacteriota
GTC
Asp
>WENV170680816
LFEF01024121
72707
Cyanobacteriota
TAA
Leu
>WENV170680721
LFEF01014463
452089
Cyanobacteriota
CCG
Arg
>WENV170680803
LFEF01023581
271063
Cyanobacteriota
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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