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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
141 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170839646
MDSZ01189271
364406
Alphaproteobacteria
GCC
Gly
>WENV170830264
MDSZ01023895
165250
Alphaproteobacteria
TGG
Pro
>WENV170842336
MDSZ01238583
252328
Alphaproteobacteria
TTT
Lys
>WENV170842337
MDSZ01238583
252328
Alphaproteobacteria
TTT
Lys
>WENV170833727
MDSZ01084820
237493
Alphaproteobacteria
CCA
Trp
>WENV170833200
MDSZ01075676
339737
Alphaproteobacteria
GAC
Val
>WENV170832113
MDSZ01056276
149985
Alphaproteobacteria
ACG
Arg
>WENV170838090
MDSZ01161403
268154
Alphaproteobacteria
TGT
Thr
>WENV170836564
MDSZ01133814
268154
Alphaproteobacteria
TGT
Thr
>WENV170829699
MDSZ01013345
268154
Alphaproteobacteria
TGT
Thr
>WENV170840802
MDSZ01211526
146757
Alphaproteobacteria
GTG
His
>WENV170838380
MDSZ01166767
350475
Alphaproteobacteria
GGT
Thr
>WENV170836036
MDSZ01123900
58865
Alphaproteobacteria
GAG
Leu
>WENV170835902
MDSZ01121726
58865
Alphaproteobacteria
GAG
Leu
>WENV170830659
MDSZ01030462
237489
Alphaproteobacteria
CAT
Met
>WENV170840430
MDSZ01204265
267922
Alphaproteobacteria
CCA
Trp
>WENV170843563
MDSZ01262566
241021
Alphaproteobacteria
GGC
Ala
>WENV170843562
MDSZ01262566
241021
Alphaproteobacteria
GGC
Ala
>WENV170830723
MDSZ01031711
193550
Alphaproteobacteria
TCT
Arg
>WENV170841523
MDSZ01223893
144964
Alphaproteobacteria
TGG
Pro
>WENV170838567
MDSZ01170251
191197
Alphaproteobacteria
CCG
Arg
>WENV170840581
MDSZ01207192
375044
Alphaproteobacteria
GCC
Gly
>WENV170837379
MDSZ01148298
375044
Alphaproteobacteria
GCC
Gly
>WENV170834782
MDSZ01102578
375044
Alphaproteobacteria
GCC
Gly
>WENV170830135
MDSZ01021694
375044
Alphaproteobacteria
GCC
Gly
>WENV170838386
MDSZ01166767
251568
Alphaproteobacteria
CCA
Trp
>WENV170839525
MDSZ01187127
23468
Alphaproteobacteria
GCT
Ser
>WENV170843399
MDSZ01259470
238045
Alphaproteobacteria
TTC
Glu
>WENV170836813
MDSZ01137935
238045
Alphaproteobacteria
TTC
Glu
>WENV170829268
MDSZ01005735
256175
Alphaproteobacteria
TGT
Thr
>WENV170833075
MDSZ01073555
257573
Alphaproteobacteria
GAA
Phe
>WENV170834491
MDSZ01097914
114616
Alphaproteobacteria
GTA
Tyr
>WENV170833374
MDSZ01078856
146875
Alphaproteobacteria
GTG
His
>WENV170839316
MDSZ01183564
282595
Alphaproteobacteria
CCA
Trp
>WENV170837843
MDSZ01156467
146683
Alphaproteobacteria
GTG
His
>WENV170839657
MDSZ01189682
339724
Alphaproteobacteria
TTG
Gln
>WENV170833689
MDSZ01084049
339724
Alphaproteobacteria
TTG
Gln
>WENV170829476
MDSZ01009528
339724
Alphaproteobacteria
TTG
Gln
>WENV170836711
MDSZ01136082
421153
Alphaproteobacteria
>WENV170830529
MDSZ01028569
421153
Alphaproteobacteria
>WENV170840662
MDSZ01208922
165266
Alphaproteobacteria
CAT
Met
>WENV170835314
MDSZ01111445
23561
Alphaproteobacteria
GGA
Ser
>WENV170830844
MDSZ01033905
190043
Alphaproteobacteria
CAT
Met
>WENV170842844
MDSZ01248399
338282
Alphaproteobacteria
GTT
Asn
>WENV170842317
MDSZ01238156
338282
Alphaproteobacteria
GTT
Asn
>WENV170837555
MDSZ01151127
338282
Alphaproteobacteria
GTT
Asn
>WENV170831302
MDSZ01041769
338282
Alphaproteobacteria
GTT
Asn
>WENV170829468
MDSZ01009404
338282
Alphaproteobacteria
GTT
Asn
>WENV170839363
MDSZ01184390
368245
Alphaproteobacteria
>WENV170836078
MDSZ01124735
95916
Alphaproteobacteria
TAG
Leu
>WENV170837704
MDSZ01154080
16408
Alphaproteobacteria
GGA
Ser
>WENV170841315
MDSZ01220220
254188
Alphaproteobacteria
CCA
Trp
>WENV170834555
MDSZ01099073
95928
Alphaproteobacteria
TAG
Leu
>WENV170832554
MDSZ01064604
162801
Alphaproteobacteria
GTG
His
>WENV170834442
MDSZ01097175
236134
Alphaproteobacteria
TAC
Val
>WENV170842007
MDSZ01232121
156543
Alphaproteobacteria
TTT
Lys
>WENV170843773
MDSZ01266057
182651
Alphaproteobacteria
GTC
Asp
>WENV170841059
MDSZ01215513
339846
Alphaproteobacteria
GAC
Val
>WENV170831277
MDSZ01041293
339846
Alphaproteobacteria
GAC
Val
>WENV170844053
MDSZ01271406
339454
Alphaproteobacteria
>WENV170836590
MDSZ01134237
82652
Alphaproteobacteria
GTA
Tyr
>WENV170829238
MDSZ01005161
160251
Alphaproteobacteria
CAT
Met
>WENV170842623
MDSZ01244224
345376
Alphaproteobacteria
GAC
Val
>WENV170838570
MDSZ01170302
345376
Alphaproteobacteria
GAC
Val
>WENV170833892
MDSZ01087863
345376
Alphaproteobacteria
GAC
Val
>WENV170838353
MDSZ01166336
96202
Alphaproteobacteria
TAG
Leu
>WENV170841794
MDSZ01228939
357160
Alphaproteobacteria
TTC
Glu
>WENV170840448
MDSZ01204634
281594
Alphaproteobacteria
TGT
Thr
>WENV170837150
MDSZ01144297
281594
Alphaproteobacteria
TGT
Thr
>WENV170835015
MDSZ01106506
281594
Alphaproteobacteria
TGT
Thr
>WENV170833016
MDSZ01072538
281594
Alphaproteobacteria
TGT
Thr
>WENV170832466
MDSZ01063044
281594
Alphaproteobacteria
TGT
Thr
>WENV170832370
MDSZ01061192
281594
Alphaproteobacteria
TGT
Thr
>WENV170832017
MDSZ01054725
281594
Alphaproteobacteria
TGT
Thr
>WENV170830022
MDSZ01019406
243803
Alphaproteobacteria
CAT
Met
>WENV170838104
MDSZ01161633
175748
Alphaproteobacteria
CAT
Met
>WENV170838916
MDSZ01176549
194755
Alphaproteobacteria
CAT
Met
>WENV170831754
MDSZ01049758
147361
Alphaproteobacteria
GGG
Pro
>WENV170829124
MDSZ01003262
97145
Alphaproteobacteria
TAG
Leu
>WENV170842923
MDSZ01249968
350547
Alphaproteobacteria
GCC
Gly
>WENV170838580
MDSZ01170429
339725
Alphaproteobacteria
GAA
Phe
>WENV170838067
MDSZ01160859
339725
Alphaproteobacteria
GAA
Phe
>WENV170843082
MDSZ01253854
192195
Alphaproteobacteria
GTC
Asp
>WENV170842490
MDSZ01241580
192195
Alphaproteobacteria
GTC
Asp
>WENV170841574
MDSZ01224809
192195
Alphaproteobacteria
GTC
Asp
>WENV170835160
MDSZ01108753
192195
Alphaproteobacteria
GTC
Asp
>WENV170840067
MDSZ01197526
258175
Alphaproteobacteria
CGC
Ala
>WENV170832982
MDSZ01071835
258175
Alphaproteobacteria
CGC
Ala
>WENV170842754
MDSZ01247051
61017
Alphaproteobacteria
CAG
Leu
>WENV170842794
MDSZ01247729
339432
Alphaproteobacteria
GTT
Asn
>WENV170831399
MDSZ01043557
239037
Alphaproteobacteria
TTT
Lys
>WENV170842085
MDSZ01233719
167926
Alphaproteobacteria
CAT
Met
>WENV170838301
MDSZ01165573
167926
Alphaproteobacteria
CAT
Met
>WENV170831119
MDSZ01038867
167926
Alphaproteobacteria
CAT
Met
>WENV170835880
MDSZ01121425
364533
Alphaproteobacteria
GCC
Gly
>WENV170840797
MDSZ01211488
364533
Alphaproteobacteria
GCC
Gly
>WENV170840514
MDSZ01206053
364533
Alphaproteobacteria
GCC
Gly
>WENV170836468
MDSZ01132207
368915
Alphaproteobacteria
GGT
Thr
>WENV170831976
MDSZ01053911
368915
Alphaproteobacteria
GGT
Thr
>WENV170838952
MDSZ01177200
254522
Alphaproteobacteria
GAA
Phe
>WENV170829691
MDSZ01013182
339305
Alphaproteobacteria
GGT
Thr
>WENV170838208
MDSZ01163691
289655
Alphaproteobacteria
GGC
Ala
>WENV170831989
MDSZ01054055
65244
Alphaproteobacteria
CAG
Leu
>WENV170840973
MDSZ01214193
148425
Alphaproteobacteria
ACG
Arg
>WENV170838218
MDSZ01163845
280207
Alphaproteobacteria
TGC
Ala
>WENV170833428
MDSZ01079679
10657
Alphaproteobacteria
GCT
Ser
>WENV170839770
MDSZ01192158
80837
Alphaproteobacteria
TAA
Leu
>WENV170842629
MDSZ01244386
338622
Alphaproteobacteria
GTT
Asn
>WENV170842628
MDSZ01244386
338622
Alphaproteobacteria
GTT
Asn
>WENV170838383
MDSZ01166767
10642
Alphaproteobacteria
GCT
Ser
>WENV170834492
MDSZ01097914
424918
Alphaproteobacteria
TCC
Gly
>WENV170838385
MDSZ01166767
152773
Alphaproteobacteria
GTG
His
>WENV170832457
MDSZ01062879
25307
Alphaproteobacteria
GGA
Ser
>WENV170840419
MDSZ01204128
24994
Alphaproteobacteria
GGA
Ser
>WENV170841892
MDSZ01230586
370641
Alphaproteobacteria
GCC
Gly
>WENV170840873
MDSZ01212768
370641
Alphaproteobacteria
GCC
Gly
>WENV170839791
MDSZ01192464
370641
Alphaproteobacteria
GCC
Gly
>WENV170834431
MDSZ01097041
370641
Alphaproteobacteria
GCC
Gly
>WENV170837829
MDSZ01156237
96322
Alphaproteobacteria
CAA
Leu
>WENV170836138
MDSZ01125952
412281
Alphaproteobacteria
CTG
Gln
>WENV170835144
MDSZ01108553
412281
Alphaproteobacteria
CTG
Gln
>WENV170839530
MDSZ01187250
266073
Alphaproteobacteria
TTT
Lys
>WENV170836664
MDSZ01135306
266073
Alphaproteobacteria
TTT
Lys
>WENV170835930
MDSZ01122045
369678
Alphaproteobacteria
GGT
Thr
>WENV170835114
MDSZ01107960
369678
Alphaproteobacteria
GGT
Thr
>WENV170836357
MDSZ01129964
369678
Alphaproteobacteria
GGT
Thr
>WENV170830148
MDSZ01021960
369678
Alphaproteobacteria
GGT
Thr
>WENV170839433
MDSZ01185456
152248
Alphaproteobacteria
TGG
Pro
>WENV170830115
MDSZ01021202
152248
Alphaproteobacteria
TGG
Pro
>WENV170836802
MDSZ01137537
339606
Alphaproteobacteria
>WENV170835857
MDSZ01121104
185456
Alphaproteobacteria
GTG
His
>WENV170843081
MDSZ01253854
289664
Alphaproteobacteria
TAC
Val
>WENV170838232
MDSZ01164225
174413
Alphaproteobacteria
CAT
Met
>WENV170837148
MDSZ01144285
174413
Alphaproteobacteria
CAT
Met
>WENV170830290
MDSZ01024361
237155
Alphaproteobacteria
>WENV170829674
MDSZ01012889
243633
Alphaproteobacteria
CGT
Thr
>WENV170842829
MDSZ01248122
10904
Alphaproteobacteria
GCT
Ser
>WENV170835614
MDSZ01117410
10904
Alphaproteobacteria
GCT
Ser
>WENV170839510
MDSZ01186788
237439
Alphaproteobacteria
CTT
Lys
>WENV170833166
MDSZ01074911
147088
Alphaproteobacteria
CCT
Arg
>WENV170838379
MDSZ01166767
237574
Alphaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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