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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
130 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170009433
APMI01000249
784639
Alphaproteobacteria
TCC
Gly
>WENV170009624
APMI01000956
273543
Alphaproteobacteria
ACG
Arg
>WENV170009732
APMI01002303
273065
Alphaproteobacteria
ACG
Arg
>WENV170009748
APMI01002480
276396
Alphaproteobacteria
CCT
Arg
>WENV170009819
APMI01003472
45999
Alphaproteobacteria
TGA
Ser
>WENV170009874
APMI01004407
452566
Alphaproteobacteria
TTT
Lys
>WENV170009902
APMI01004675
273448
Alphaproteobacteria
CGG
Pro
>WENV170009922
APMI01005114
275867
Alphaproteobacteria
GTG
His
>WENV170009928
APMI01005297
180409
Alphaproteobacteria
GTA
Tyr
>WENV170009963
APMI01005934
780024
Alphaproteobacteria
GCA
Cys
>WENV170010035
APMI01007156
464601
Alphaproteobacteria
CGT
Thr
>WENV170010100
APMI01008488
270796
Alphaproteobacteria
GTC
Asp
>WENV170010101
APMI01008488
270796
Alphaproteobacteria
GTC
Asp
>WENV170010123
APMI01009156
454056
Alphaproteobacteria
CGT
Thr
>WENV170010133
APMI01009420
661074
Alphaproteobacteria
GCC
Gly
>WENV170010162
APMI01010018
46093
Alphaproteobacteria
GGA
Ser
>WENV170010177
APMI01010239
454623
Alphaproteobacteria
TAC
Val
>WENV170010199
APMI01010732
270892
Alphaproteobacteria
CGG
Pro
>WENV170010235
APMI01011178
282797
Alphaproteobacteria
GTG
His
>WENV170010250
APMI01011515
273536
Alphaproteobacteria
GTG
His
>WENV170010255
APMI01011666
180421
Alphaproteobacteria
GTA
Tyr
>WENV170010302
APMI01013133
654960
Alphaproteobacteria
CTC
Glu
>WENV170010304
APMI01013171
654960
Alphaproteobacteria
CTC
Glu
>WENV170010319
APMI01013588
454318
Alphaproteobacteria
GGC
Ala
>WENV170010334
APMI01014057
653539
Alphaproteobacteria
GAC
Val
>WENV170010337
APMI01014236
454565
Alphaproteobacteria
CTT
Lys
>WENV170010353
APMI01014501
275867
Alphaproteobacteria
GTG
His
>WENV170010362
APMI01014755
273452
Alphaproteobacteria
CAT
Met
>WENV170010411
APMI01016413
294262
Alphaproteobacteria
CCT
Arg
>WENV170010414
APMI01016456
180864
Alphaproteobacteria
CAG
Leu
>WENV170010450
APMI01017338
780260
Alphaproteobacteria
GCA
Cys
>WENV170010470
APMI01017950
454054
Alphaproteobacteria
TGC
Ala
>WENV170010471
APMI01018059
274107
Alphaproteobacteria
CCT
Arg
>WENV170010479
APMI01018241
46272
Alphaproteobacteria
CGA
Ser
>WENV170010483
APMI01018318
663828
Alphaproteobacteria
TTC
Glu
>WENV170010587
APMI01021511
45990
Alphaproteobacteria
GCT
Ser
>WENV170010589
APMI01021585
180414
Alphaproteobacteria
CAG
Leu
>WENV170010608
APMI01022445
653591
Alphaproteobacteria
TTG
Gln
>WENV170010637
APMI01023319
780884
Alphaproteobacteria
CTG
Gln
>WENV170010641
APMI01023371
654913
Alphaproteobacteria
GTT
Asn
>WENV170010666
APMI01024514
282974
Alphaproteobacteria
GTG
His
>WENV170010669
APMI01024606
654998
Alphaproteobacteria
GCC
Gly
>WENV170010699
APMI01025612
780884
Alphaproteobacteria
CTG
Gln
>WENV170010709
APMI01026005
464601
Alphaproteobacteria
CGT
Thr
>WENV170010759
APMI01027941
270892
Alphaproteobacteria
CGG
Pro
>WENV170010766
APMI01028162
653518
Alphaproteobacteria
GAC
Val
>WENV170010786
APMI01028944
48659
Alphaproteobacteria
CGA
Ser
>WENV170010792
APMI01029082
116949
Alphaproteobacteria
CAG
Leu
>WENV170010825
APMI01030291
270887
Alphaproteobacteria
TGG
Pro
>WENV170010854
APMI01031941
179995
Alphaproteobacteria
TAG
Leu
>WENV170010856
APMI01031956
779636
Alphaproteobacteria
CTG
Gln
>WENV170010858
APMI01032010
274236
Alphaproteobacteria
TCT
Arg
>WENV170010891
APMI01033580
656942
Alphaproteobacteria
TTC
Glu
>WENV170010892
APMI01033580
654791
Alphaproteobacteria
CTC
Glu
>WENV170010894
APMI01033932
270887
Alphaproteobacteria
TGG
Pro
>WENV170010895
APMI01033932
275868
Alphaproteobacteria
TCT
Arg
>WENV170010909
APMI01034480
654997
Alphaproteobacteria
CTC
Glu
>WENV170010932
APMI01035340
454566
Alphaproteobacteria
GAA
Phe
>WENV170010950
APMI01036059
455126
Alphaproteobacteria
TGC
Ala
>WENV170010979
APMI01037546
457363
Alphaproteobacteria
CCA
Trp
>WENV170010993
APMI01038372
112742
Alphaproteobacteria
GAG
Leu
>WENV170010998
APMI01038524
274039
Alphaproteobacteria
CAT
Met
>WENV170010999
APMI01038620
180898
Alphaproteobacteria
CAG
Leu
>WENV170011003
APMI01038859
281955
Alphaproteobacteria
CAT
Met
>WENV170011011
APMI01039373
655000
Alphaproteobacteria
GAC
Val
>WENV170011039
APMI01040761
454504
Alphaproteobacteria
CAT
Met
>WENV170011055
APMI01041150
294326
Alphaproteobacteria
CCG
Arg
>WENV170011056
APMI01041295
654962
Alphaproteobacteria
TTG
Gln
>WENV170011083
APMI01042782
112749
Alphaproteobacteria
CAG
Leu
>WENV170011107
APMI01043943
273543
Alphaproteobacteria
ACG
Arg
>WENV170011122
APMI01044621
653532
Alphaproteobacteria
GTT
Asn
>WENV170011127
APMI01044808
654986
Alphaproteobacteria
GCC
Gly
>WENV170011132
APMI01045315
463196
Alphaproteobacteria
CAT
Met
>WENV170011196
APMI01049264
654986
Alphaproteobacteria
GCC
Gly
>WENV170011223
APMI01050805
655013
Alphaproteobacteria
TGT
Thr
>WENV170011224
APMI01050846
452624
Alphaproteobacteria
CGT
Thr
>WENV170011274
APMI01053640
46272
Alphaproteobacteria
CGA
Ser
>WENV170011327
APMI01056298
454166
Alphaproteobacteria
CGC
Ala
>WENV170011358
APMI01060111
294365
Alphaproteobacteria
GAT
Ile
>WENV170011369
APMI01061150
474526
Alphaproteobacteria
TAC
Val
>WENV170011371
APMI01061328
271268
Alphaproteobacteria
CAT
Met
>WENV170011385
APMI01062374
294369
Alphaproteobacteria
CGG
Pro
>WENV170011384
APMI01062374
780104
Alphaproteobacteria
TTG
Gln
>WENV170011386
APMI01062417
454593
Alphaproteobacteria
CGC
Ala
>WENV170011390
APMI01062715
454697
Alphaproteobacteria
TAC
Val
>WENV170011409
APMI01063947
273519
Alphaproteobacteria
CAT
Met
>WENV170011462
APMI01067021
780159
Alphaproteobacteria
CTG
Gln
>WENV170011482
APMI01068369
654017
Alphaproteobacteria
TGT
Thr
>WENV170011494
APMI01069523
455172
Alphaproteobacteria
GGC
Ala
>WENV170011503
APMI01070058
180421
Alphaproteobacteria
GTA
Tyr
>WENV170011514
APMI01071249
454180
Alphaproteobacteria
CGT
Thr
>WENV170011532
APMI01072528
271268
Alphaproteobacteria
CAT
Met
>WENV170011587
APMI01075282
273515
Alphaproteobacteria
TCT
Arg
>WENV170011597
APMI01076511
654996
Alphaproteobacteria
TTC
Glu
>WENV170011715
APMI01084771
113418
Alphaproteobacteria
CAG
Leu
>WENV170011732
APMI01086418
273448
Alphaproteobacteria
CGG
Pro
>WENV170011766
APMI01089461
270775
Alphaproteobacteria
ACG
Arg
>WENV170011806
APMI01092826
48680
Alphaproteobacteria
GGA
Ser
>WENV170011846
APMI01096086
453945
Alphaproteobacteria
CTT
Lys
>WENV170011865
APMI01097779
270896
Alphaproteobacteria
CCG
Arg
>WENV170011890
APMI01099903
240992
Alphaproteobacteria
GGG
Pro
>WENV170011891
APMI01099904
240992
Alphaproteobacteria
GGG
Pro
>WENV170011895
APMI01100521
273518
Alphaproteobacteria
CCT
Arg
>WENV170011917
APMI01102546
454625
Alphaproteobacteria
CAT
Met
>WENV170011927
APMI01103643
452565
Alphaproteobacteria
GAA
Phe
>WENV170011931
APMI01104234
45932
Alphaproteobacteria
GGA
Ser
>WENV170011940
APMI01104880
477874
Alphaproteobacteria
CCA
Trp
>WENV170011949
APMI01105951
468148
Alphaproteobacteria
TGC
Ala
>WENV170011981
APMI01107984
45999
Alphaproteobacteria
TGA
Ser
>WENV170012003
APMI01109444
454565
Alphaproteobacteria
CTT
Lys
>WENV170012019
APMI01111708
276075
Alphaproteobacteria
GTG
His
>WENV170012020
APMI01112069
30494
Alphaproteobacteria
GCT
Ser
>WENV170012061
APMI01115831
454434
Alphaproteobacteria
GGC
Ala
>WENV170012078
APMI01117803
656942
Alphaproteobacteria
TTC
Glu
>WENV170012099
APMI01120135
273536
Alphaproteobacteria
GTG
His
>WENV170012150
APMI01126637
287555
Alphaproteobacteria
CAT
Met
>WENV170012213
APMI01136790
287555
Alphaproteobacteria
CAT
Met
>WENV170012235
APMI01140027
451867
Alphaproteobacteria
CTT
Lys
>WENV170012283
APMI01146368
45994
Alphaproteobacteria
CGA
Ser
>WENV170012311
APMI01150672
452629
Alphaproteobacteria
GAA
Phe
>WENV170012322
APMI01153793
654017
Alphaproteobacteria
TGT
Thr
>WENV170012323
APMI01153980
655013
Alphaproteobacteria
TGT
Thr
>WENV170012338
APMI01157185
276089
Alphaproteobacteria
CCG
Arg
>WENV170012345
APMI01157970
655361
Alphaproteobacteria
GCC
Gly
>WENV170012361
APMI01160668
658305
Alphaproteobacteria
GAC
Val
>WENV170012375
APMI01164286
276075
Alphaproteobacteria
GTG
His
>WENV170012383
APMI01166221
463196
Alphaproteobacteria
CAT
Met
>WENV170012400
APMI01168507
465416
Alphaproteobacteria
TTC
Glu
>WENV170012413
APMI01171030
113518
Alphaproteobacteria
CAG
Leu
>WENV170012416
APMI01171299
288840
Alphaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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