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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170671463
LAHU01061877
358256
Euryarchaeota
>WENV170671715
LAHU01137622
358256
Euryarchaeota
>WENV170671185
LAHU01023360
80959
Euryarchaeota
CAG
Leu
>WENV170671605
LAHU01102728
129630
Euryarchaeota
CAT
Met
>WENV170671696
LAHU01133190
129630
Euryarchaeota
CAT
Met
>WENV170671061
LAHU01010551
147570
Euryarchaeota
CAT
Met
>WENV170671102
LAHU01013869
360399
Euryarchaeota
CGC
Ala
>WENV170671364
LAHU01043031
147569
Euryarchaeota
CGT
Thr
>WENV170671778
LAHU01164474
238535
Euryarchaeota
CTG
Gln
>WENV170671205
LAHU01025615
238275
Euryarchaeota
GAA
Phe
>WENV170671589
LAHU01095375
238275
Euryarchaeota
GAA
Phe
>WENV170671950
LAHU01237914
59292
Euryarchaeota
GAG
Leu
>WENV170672034
LAHU01279001
238270
Euryarchaeota
GAT
Ile
>WENV170670993
LAHU01007473
339835
Euryarchaeota
GCA
Cys
>WENV170671147
LAHU01019053
339835
Euryarchaeota
GCA
Cys
>WENV170670774
LAHU01000802
339971
Euryarchaeota
GCC
Gly
>WENV170670778
LAHU01001000
339971
Euryarchaeota
GCC
Gly
>WENV170670967
LAHU01006576
339971
Euryarchaeota
GCC
Gly
>WENV170671815
LAHU01177586
339971
Euryarchaeota
GCC
Gly
>WENV170671395
LAHU01046462
348437
Euryarchaeota
GCG
Arg
>WENV170670739
LAHU01000138
45267
Euryarchaeota
GCT
Ser
>WENV170670841
LAHU01002264
45267
Euryarchaeota
GCT
Ser
>WENV170671131
LAHU01017321
45267
Euryarchaeota
GCT
Ser
>WENV170671519
LAHU01071802
45267
Euryarchaeota
GCT
Ser
>WENV170671819
LAHU01179837
47355
Euryarchaeota
GCT
Ser
>WENV170671119
LAHU01015446
45224
Euryarchaeota
GGA
Ser
>WENV170670961
LAHU01006430
147567
Euryarchaeota
GGC
Ala
>WENV170671565
LAHU01087301
238274
Euryarchaeota
GGT
Thr
>WENV170670881
LAHU01003268
147565
Euryarchaeota
GTA
Tyr
>WENV170670882
LAHU01003268
351617
Euryarchaeota
GTC
Asp
>WENV170670735
LAHU01000125
238541
Euryarchaeota
GTT
Asn
>WENV170670837
LAHU01002204
238541
Euryarchaeota
GTT
Asn
>WENV170670942
LAHU01005645
238541
Euryarchaeota
GTT
Asn
>WENV170671823
LAHU01182434
238541
Euryarchaeota
GTT
Asn
>WENV170670814
LAHU01001836
256153
Euryarchaeota
GTT
Asn
>WENV170671060
LAHU01010551
238271
Euryarchaeota
GTT
Asn
>WENV170671563
LAHU01087300
238271
Euryarchaeota
GTT
Asn
>WENV170670757
LAHU01000467
411995
Euryarchaeota
TCC
Gly
>WENV170671353
LAHU01041890
411995
Euryarchaeota
TCC
Gly
>WENV170672019
LAHU01272838
123294
Euryarchaeota
TCG
Arg
>WENV170671032
LAHU01009364
129634
Euryarchaeota
TCT
Arg
>WENV170671402
LAHU01046962
147563
Euryarchaeota
TCT
Arg
>WENV170671403
LAHU01046962
147563
Euryarchaeota
TCT
Arg
>WENV170670960
LAHU01006428
147573
Euryarchaeota
TGC
Ala
>WENV170671701
LAHU01135063
182331
Euryarchaeota
TGT
Thr
>WENV170671062
LAHU01010551
127135
Euryarchaeota
TTC
Glu
>WENV170670910
LAHU01004275
143090
Euryarchaeota
TTC
Glu
>WENV170671622
LAHU01108229
339841
Euryarchaeota
TTG
Gln
>WENV170670883
LAHU01003268
153995
Euryarchaeota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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