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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
102 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180503698
OCAN01000012
270475
Bacillota
GAA
Phe
>WENV180503815
OCAN01000068
270475
Bacillota
GAA
Phe
>WENV180504525
OCAN01005237
266850
Bacillota
CGC
Ala
>WENV180503813
OCAN01000068
235519
Bacillota
TAC
Val
>WENV180504364
OCAN01001869
235519
Bacillota
TAC
Val
>WENV180503749
OCAN01000034
267649
Bacillota
TAC
Val
>WENV180503751
OCAN01000034
267649
Bacillota
TAC
Val
>WENV180504022
OCAN01000325
267649
Bacillota
TAC
Val
>WENV180504077
OCAN01000440
267649
Bacillota
TAC
Val
>WENV180504232
OCAN01000946
267649
Bacillota
TAC
Val
>WENV180503703
OCAN01000013
267556
Bacillota
TAC
Val
>WENV180503705
OCAN01000013
267556
Bacillota
TAC
Val
>WENV180503727
OCAN01000021
339890
Bacillota
TTG
Gln
>WENV180504504
OCAN01004417
340144
Bacillota
CCC
Gly
>WENV180504199
OCAN01000802
340263
Bacillota
TTC
Glu
>WENV180504109
OCAN01000485
340263
Bacillota
TTC
Glu
>WENV180503853
OCAN01000094
340263
Bacillota
TTC
Glu
>WENV180503715
OCAN01000017
242961
Bacillota
GGT
Thr
>WENV180503910
OCAN01000153
23769
Bacillota
TAA
Leu
>WENV180503767
OCAN01000044
23769
Bacillota
TAA
Leu
>WENV180504250
OCAN01001015
148139
Bacillota
GGG
Pro
>WENV180504713
OCAN01040568
235154
Bacillota
GTT
Asn
>WENV180504472
OCAN01003671
241441
Bacillota
GCC
Gly
>WENV180504257
OCAN01001042
241441
Bacillota
GCC
Gly
>WENV180504553
OCAN01006923
340146
Bacillota
CTG
Gln
>WENV180504511
OCAN01004568
148147
Bacillota
ACG
Arg
>WENV180503811
OCAN01000068
10912
Bacillota
GGA
Ser
>WENV180504102
OCAN01000485
148348
Bacillota
GTC
Asp
>WENV180503855
OCAN01000094
148348
Bacillota
GTC
Asp
>WENV180504539
OCAN01006298
246023
Bacillota
TGC
Ala
>WENV180504091
OCAN01000460
239080
Bacillota
CTG
Gln
>WENV180504624
OCAN01015330
235137
Bacillota
TGC
Ala
>WENV180504708
OCAN01037499
96157
Bacillota
GTA
Tyr
>WENV180504490
OCAN01003957
96157
Bacillota
GTA
Tyr
>WENV180504424
OCAN01002669
238858
Bacillota
TTG
Gln
>WENV180504085
OCAN01000451
338143
Bacillota
CTC
Glu
>WENV180504005
OCAN01000291
338143
Bacillota
CTC
Glu
>WENV180504004
OCAN01000291
338143
Bacillota
CTC
Glu
>WENV180504498
OCAN01004306
341763
Bacillota
CTC
Glu
>WENV180504329
OCAN01001560
37279
Bacillota
TGA
Ser
>WENV180503665
OCAN01000003
81586
Bacillota
GAG
Leu
>WENV180504021
OCAN01000325
144668
Bacillota
GTC
Asp
>WENV180503661
OCAN01000001
44859
Bacillota
AAG
Leu
>WENV180503660
OCAN01000001
44859
Bacillota
AAG
Leu
>WENV180504103
OCAN01000485
239076
Bacillota
GAA
Phe
>WENV180503856
OCAN01000094
239076
Bacillota
GAA
Phe
>WENV180503721
OCAN01000018
16778
Bacillota
CGA
Ser
>WENV180503819
OCAN01000068
359258
Bacillota
TTG
Gln
>WENV180503720
OCAN01000018
359258
Bacillota
TTG
Gln
>WENV180503839
OCAN01000078
243646
Bacillota
GTT
Asn
>WENV180503840
OCAN01000078
235697
Bacillota
GTT
Asn
>WENV180504392
OCAN01002215
148146
Bacillota
CCG
Arg
>WENV180504203
OCAN01000802
340265
Bacillota
GCC
Gly
>WENV180504202
OCAN01000802
340265
Bacillota
GCC
Gly
>WENV180504201
OCAN01000802
340265
Bacillota
GCC
Gly
>WENV180503992
OCAN01000265
340265
Bacillota
GCC
Gly
>WENV180504370
OCAN01001869
162028
Bacillota
ACG
Arg
>WENV180504330
OCAN01001560
10707
Bacillota
GCT
Ser
>WENV180504491
OCAN01003957
238860
Bacillota
GGT
Thr
>WENV180504455
OCAN01003139
238853
Bacillota
TAC
Val
>WENV180504693
OCAN01033962
338531
Bacillota
GCC
Gly
>WENV180504659
OCAN01025342
37269
Bacillota
TGA
Ser
>WENV180504078
OCAN01000440
155089
Bacillota
CAT
Met
>WENV180504423
OCAN01002669
235636
Bacillota
GTG
His
>WENV180504079
OCAN01000443
413152
Bacillota
TCC
Gly
>WENV180504548
OCAN01006644
81037
Bacillota
CAG
Leu
>WENV180504154
OCAN01000641
148138
Bacillota
CCT
Arg
>WENV180504707
OCAN01037499
238856
Bacillota
TGT
Thr
>WENV180504557
OCAN01006989
238859
Bacillota
GAC
Val
>WENV180504193
OCAN01000779
254697
Bacillota
TTT
Lys
>WENV180504593
OCAN01010549
10708
Bacillota
GGA
Ser
>WENV180504200
OCAN01000802
239079
Bacillota
TAC
Val
>WENV180503857
OCAN01000094
239079
Bacillota
TAC
Val
>WENV180503854
OCAN01000094
239079
Bacillota
TAC
Val
>WENV180504168
OCAN01000686
59296
Bacillota
AAG
Leu
>WENV180504060
OCAN01000392
235127
Bacillota
TTT
Lys
>WENV180504027
OCAN01000325
235127
Bacillota
TTT
Lys
>WENV180503822
OCAN01000068
342664
Bacillota
>WENV180503802
OCAN01000062
96872
Bacillota
>WENV180504057
OCAN01000392
147674
Bacillota
TCT
Arg
>WENV180504425
OCAN01002669
238855
Bacillota
TTT
Lys
>WENV180504412
OCAN01002420
148140
Bacillota
GTC
Asp
>WENV180504366
OCAN01001869
101373
Bacillota
TAG
Leu
>WENV180504275
OCAN01001120
238852
Bacillota
GGC
Ala
>WENV180504426
OCAN01002674
23772
Bacillota
GAG
Leu
>WENV180504422
OCAN01002669
148145
Bacillota
TCT
Arg
>WENV180504410
OCAN01002420
340145
Bacillota
GTT
Asn
>WENV180504198
OCAN01000802
239078
Bacillota
TTT
Lys
>WENV180503852
OCAN01000094
239078
Bacillota
TTT
Lys
>WENV180504212
OCAN01000855
261708
Bacillota
CCA
Trp
>WENV180504524
OCAN01005237
242686
Bacillota
TGC
Ala
>WENV180504458
OCAN01003276
242686
Bacillota
TGC
Ala
>WENV180504378
OCAN01001946
148142
Bacillota
CGG
Pro
>WENV180504718
OCAN01048513
413657
Bacillota
CCC
Gly
>WENV180504405
OCAN01002352
148141
Bacillota
CTT
Lys
>WENV180503686
OCAN01000012
174818
Bacillota
CAT
Met
>WENV180504365
OCAN01001869
253547
Bacillota
TTT
Lys
>WENV180504406
OCAN01002352
238857
Bacillota
CCA
Trp
>WENV180504411
OCAN01002420
339659
Bacillota
TTC
Glu
>WENV180504568
OCAN01007775
338131
Bacillota
GCC
Gly
>WENV180504178
OCAN01000727
338131
Bacillota
GCC
Gly
>WENV180503784
OCAN01000054
338131
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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