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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170676184
LDZR01001434
301818
Thermotogota
GCA
Cys
>WENV170676185
LDZR01001451
485651
Thermotogota
TTC
Glu
>WENV170676180
LDZR01001299
301825
Thermotogota
GCG
Arg
>WENV170676070
LDZR01000710
653889
Thermotogota
GAC
Val
>WENV170676435
LDZR01002678
653889
Thermotogota
GAC
Val
>WENV170676171
LDZR01001290
485662
Thermotogota
CCA
Trp
>WENV170676181
LDZR01001314
33018
Thermotogota
GGA
Ser
>WENV170676165
LDZR01001289
673251
Thermotogota
GCC
Gly
>WENV170676078
LDZR01000805
452492
Thermotogota
GAA
Phe
>WENV170676463
LDZR01002707
452492
Thermotogota
GAA
Phe
>WENV170676178
LDZR01001299
485666
Thermotogota
CGC
Ala
>WENV170676069
LDZR01000707
452490
Thermotogota
TCG
Arg
>WENV170676467
LDZR01002710
452490
Thermotogota
TCG
Arg
>WENV170676045
LDZR01000631
782080
Thermotogota
CTG
Gln
>WENV170676161
LDZR01001276
485655
Thermotogota
GTT
Asn
>WENV170676061
LDZR01000660
452491
Thermotogota
TTC
Glu
>WENV170676461
LDZR01002701
452491
Thermotogota
TTC
Glu
>WENV170676183
LDZR01001336
301819
Thermotogota
CAT
Met
>WENV170676154
LDZR01001251
673249
Thermotogota
CAC
Val
>WENV170676052
LDZR01000644
271523
Thermotogota
GGC
Ala
>WENV170676156
LDZR01001262
788528
Thermotogota
TTG
Gln
>WENV170676169
LDZR01001290
485661
Thermotogota
TGT
Thr
>WENV170676166
LDZR01001289
74847
Thermotogota
TGA
Ser
>WENV170676063
LDZR01000667
271524
Thermotogota
GCG
Arg
>WENV170676451
LDZR01002692
271524
Thermotogota
GCG
Arg
>WENV170676164
LDZR01001289
118628
Thermotogota
TAG
Leu
>WENV170676186
LDZR01001464
49767
Thermotogota
TAA
Leu
>WENV170676177
LDZR01001299
301822
Thermotogota
TCG
Arg
>WENV170676168
LDZR01001290
485660
Thermotogota
CAT
Met
>WENV170676155
LDZR01001257
788529
Thermotogota
CTG
Gln
>WENV170676163
LDZR01001289
485658
Thermotogota
TTT
Lys
>WENV170676158
LDZR01001265
118627
Thermotogota
CAA
Leu
>WENV170676157
LDZR01001264
301823
Thermotogota
TGG
Pro
>WENV170676176
LDZR01001299
485664
Thermotogota
GTG
His
>WENV170676182
LDZR01001336
485656
Thermotogota
CCC
Gly
>WENV170676162
LDZR01001286
74846
Thermotogota
CGA
Ser
>WENV170676174
LDZR01001299
485663
Thermotogota
TCC
Gly
>WENV170676173
LDZR01001296
301820
Thermotogota
CGG
Pro
>WENV170676153
LDZR01001250
244795
Thermotogota
GTC
Asp
>WENV170676047
LDZR01000633
271518
Thermotogota
GGT
Thr
>WENV170676160
LDZR01001274
271518
Thermotogota
GGT
Thr
>WENV170676430
LDZR01002677
271518
Thermotogota
GGT
Thr
>WENV170676172
LDZR01001292
485652
Thermotogota
CCG
Arg
>WENV170676159
LDZR01001269
485657
Thermotogota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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