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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170675681
LDZQ01000004
245516
Euryarchaeota
CTG
Gln
>WENV170675691
LDZQ01000157
59340
Euryarchaeota
CGA
Ser
>WENV170675693
LDZQ01000203
147803
Euryarchaeota
TCT
Arg
>WENV170675694
LDZQ01000272
147803
Euryarchaeota
TCT
Arg
>WENV170675696
LDZQ01000276
147573
Euryarchaeota
TGC
Ala
>WENV170675697
LDZQ01000296
147568
Euryarchaeota
GCC
Gly
>WENV170675786
LDZQ01000575
127426
Euryarchaeota
GAT
Ile
>WENV170675787
LDZQ01000576
240388
Euryarchaeota
CAC
Val
>WENV170675790
LDZQ01000577
341095
Euryarchaeota
GCA
Cys
>WENV170675797
LDZQ01000580
240396
Euryarchaeota
>WENV170675802
LDZQ01000583
341091
Euryarchaeota
>WENV170675804
LDZQ01000584
341091
Euryarchaeota
>WENV170675805
LDZQ01000585
240396
Euryarchaeota
>WENV170675806
LDZQ01000585
149504
Euryarchaeota
TTT
Lys
>WENV170675807
LDZQ01000586
341101
Euryarchaeota
GTG
His
>WENV170675810
LDZQ01000590
412930
Euryarchaeota
TCC
Gly
>WENV170675814
LDZQ01000600
66374
Euryarchaeota
TAA
Leu
>WENV170675816
LDZQ01000602
127425
Euryarchaeota
CAT
Met
>WENV170675817
LDZQ01000608
81228
Euryarchaeota
>WENV170675818
LDZQ01000609
127422
Euryarchaeota
CTC
Glu
>WENV170675819
LDZQ01000614
412923
Euryarchaeota
CCC
Gly
>WENV170675822
LDZQ01000639
81228
Euryarchaeota
>WENV170675823
LDZQ01000715
348437
Euryarchaeota
GCG
Arg
>WENV170675827
LDZQ01000830
238271
Euryarchaeota
GTT
Asn
>WENV170675828
LDZQ01000830
147570
Euryarchaeota
CAT
Met
>WENV170675829
LDZQ01000830
143090
Euryarchaeota
TTC
Glu
>WENV170675830
LDZQ01000830
62605
Euryarchaeota
TAG
Leu
>WENV170675833
LDZQ01000861
163825
Euryarchaeota
TGT
Thr
>WENV170675872
LDZQ01001155
266373
Euryarchaeota
TGC
Ala
>WENV170675873
LDZQ01001155
350749
Euryarchaeota
GCA
Cys
>WENV170675877
LDZQ01001160
238541
Euryarchaeota
GTT
Asn
>WENV170675890
LDZQ01001192
163825
Euryarchaeota
TGT
Thr
>WENV170675893
LDZQ01001192
339836
Euryarchaeota
GTC
Asp
>WENV170675894
LDZQ01001192
153995
Euryarchaeota
TTT
Lys
>WENV170675899
LDZQ01001197
47224
Euryarchaeota
GGA
Ser
>WENV170675902
LDZQ01001209
147567
Euryarchaeota
GGC
Ala
>WENV170675903
LDZQ01001224
80961
Euryarchaeota
TAA
Leu
>WENV170675905
LDZQ01001231
238271
Euryarchaeota
GTT
Asn
>WENV170675907
LDZQ01001231
143090
Euryarchaeota
TTC
Glu
>WENV170675908
LDZQ01001231
62605
Euryarchaeota
TAG
Leu
>WENV170675911
LDZQ01001234
129630
Euryarchaeota
CAT
Met
>WENV170675912
LDZQ01001239
147568
Euryarchaeota
GCC
Gly
>WENV170675914
LDZQ01001263
238275
Euryarchaeota
GAA
Phe
>WENV170675917
LDZQ01001311
129313
Euryarchaeota
>WENV170675918
LDZQ01001311
129313
Euryarchaeota
>WENV170675919
LDZQ01001315
129630
Euryarchaeota
CAT
Met
>WENV170675920
LDZQ01001334
147568
Euryarchaeota
GCC
Gly
>WENV170675971
LDZQ01001544
127175
Euryarchaeota
GCC
Gly
>WENV170675972
LDZQ01001546
59342
Euryarchaeota
GCT
Ser
>WENV170675974
LDZQ01001546
127165
Euryarchaeota
GCG
Arg
>WENV170675975
LDZQ01001546
47416
Euryarchaeota
TAA
Leu
>WENV170675976
LDZQ01001547
137702
Euryarchaeota
>WENV170675977
LDZQ01001548
127169
Euryarchaeota
TTC
Glu
>WENV170675978
LDZQ01001554
127174
Euryarchaeota
TTT
Lys
>WENV170675979
LDZQ01001565
147802
Euryarchaeota
CGT
Thr
>WENV170675980
LDZQ01001581
50970
Euryarchaeota
>WENV170675982
LDZQ01001619
238529
Euryarchaeota
>WENV170675984
LDZQ01001625
127166
Euryarchaeota
CAT
Met
>WENV170675986
LDZQ01001625
147806
Euryarchaeota
TGT
Thr
>WENV170675987
LDZQ01001625
127183
Euryarchaeota
TGG
Pro
>WENV170675988
LDZQ01001636
127164
Euryarchaeota
CTT
Lys
>WENV170675989
LDZQ01001657
147800
Euryarchaeota
GAA
Phe
>WENV170675990
LDZQ01001658
138682
Euryarchaeota
CAC
Val
>WENV170675991
LDZQ01001666
50222
Euryarchaeota
>WENV170675993
LDZQ01001676
147799
Euryarchaeota
GTG
His
>WENV170675994
LDZQ01001680
147801
Euryarchaeota
TAC
Val
>WENV170675995
LDZQ01001688
50222
Euryarchaeota
>WENV170675996
LDZQ01001688
131310
Euryarchaeota
GGG
Pro
>WENV170675997
LDZQ01001692
127178
Euryarchaeota
>WENV170675998
LDZQ01001692
127179
Euryarchaeota
GAT
Ile
>WENV170676002
LDZQ01001773
59340
Euryarchaeota
CGA
Ser
>WENV170676003
LDZQ01001799
127168
Euryarchaeota
GTC
Asp
>WENV170676004
LDZQ01001804
147798
Euryarchaeota
GGT
Thr
>WENV170676005
LDZQ01001828
147802
Euryarchaeota
CGT
Thr
>WENV170676006
LDZQ01001865
59342
Euryarchaeota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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