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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
154 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170562913
CZCB01007222
341849
Bacillota
TTC
Glu
>WENV170561916
CZCB01000358
339630
Bacillota
GCC
Gly
>WENV170562227
CZCB01001440
339630
Bacillota
GCC
Gly
>WENV170562705
CZCB01004783
339630
Bacillota
GCC
Gly
>WENV170562784
CZCB01005341
339630
Bacillota
GCC
Gly
>WENV170562942
CZCB01007693
339630
Bacillota
GCC
Gly
>WENV170563235
CZCB01012252
339630
Bacillota
GCC
Gly
>WENV170563643
CZCB01023620
339630
Bacillota
GCC
Gly
>WENV170563863
CZCB01032782
339630
Bacillota
GCC
Gly
>WENV170563584
CZCB01021860
156958
Bacillota
GAT
Ile
>WENV170563901
CZCB01034914
235634
Bacillota
CTT
Lys
>WENV170562256
CZCB01001676
152155
Bacillota
ACG
Arg
>WENV170562211
CZCB01001422
158247
Bacillota
>WENV170563246
CZCB01012374
238816
Bacillota
GAA
Phe
>WENV170562889
CZCB01006761
238816
Bacillota
GAA
Phe
>WENV170562466
CZCB01002978
238816
Bacillota
GAA
Phe
>WENV170562183
CZCB01001319
238816
Bacillota
GAA
Phe
>WENV170562085
CZCB01000805
238816
Bacillota
GAA
Phe
>WENV170563542
CZCB01020959
243231
Bacillota
TTT
Lys
>WENV170563232
CZCB01012238
243231
Bacillota
TTT
Lys
>WENV170564084
CZCB01048023
254900
Bacillota
TTT
Lys
>WENV170562609
CZCB01003892
241566
Bacillota
TAC
Val
>WENV170562464
CZCB01002978
241566
Bacillota
TAC
Val
>WENV170564077
CZCB01046526
150957
Bacillota
GAC
Val
>WENV170563954
CZCB01038669
150957
Bacillota
GAC
Val
>WENV170563914
CZCB01036392
60495
Bacillota
CAA
Leu
>WENV170562221
CZCB01001440
412448
Bacillota
TCC
Gly
>WENV170563826
CZCB01031002
236179
Bacillota
TAC
Val
>WENV170563207
CZCB01011987
236179
Bacillota
TAC
Val
>WENV170562020
CZCB01000644
236179
Bacillota
TAC
Val
>WENV170563070
CZCB01009623
243346
Bacillota
TGC
Ala
>WENV170562552
CZCB01003539
155273
Bacillota
CAT
Met
>WENV170562532
CZCB01003376
155273
Bacillota
CAT
Met
>WENV170562066
CZCB01000792
155273
Bacillota
CAT
Met
>WENV170563568
CZCB01021575
38384
Bacillota
TAA
Leu
>WENV170563565
CZCB01021575
38384
Bacillota
TAA
Leu
>WENV170563497
CZCB01020089
238989
Bacillota
GAA
Phe
>WENV170562424
CZCB01002710
162603
Bacillota
GAT
Ile
>WENV170563438
CZCB01018115
235903
Bacillota
TTT
Lys
>WENV170562710
CZCB01004783
37083
Bacillota
TGA
Ser
>WENV170562384
CZCB01002403
24334
Bacillota
TAA
Leu
>WENV170564006
CZCB01041691
353391
Bacillota
GCC
Gly
>WENV170563803
CZCB01030209
353391
Bacillota
GCC
Gly
>WENV170563498
CZCB01020089
353391
Bacillota
GCC
Gly
>WENV170562880
CZCB01006695
353391
Bacillota
GCC
Gly
>WENV170562579
CZCB01003685
353391
Bacillota
GCC
Gly
>WENV170562378
CZCB01002356
353391
Bacillota
GCC
Gly
>WENV170562354
CZCB01002266
353391
Bacillota
GCC
Gly
>WENV170562005
CZCB01000575
353391
Bacillota
GCC
Gly
>WENV170563651
CZCB01024026
148104
Bacillota
CAT
Met
>WENV170563533
CZCB01020781
148104
Bacillota
CAT
Met
>WENV170563260
CZCB01012801
148104
Bacillota
CAT
Met
>WENV170562527
CZCB01003330
148104
Bacillota
CAT
Met
>WENV170561845
CZCB01000223
148104
Bacillota
CAT
Met
>WENV170563959
CZCB01039237
258317
Bacillota
TTG
Gln
>WENV170563532
CZCB01020781
243227
Bacillota
GTT
Asn
>WENV170563393
CZCB01016912
243227
Bacillota
GTT
Asn
>WENV170562750
CZCB01005039
243227
Bacillota
GTT
Asn
>WENV170562551
CZCB01003539
243227
Bacillota
GTT
Asn
>WENV170562531
CZCB01003376
243227
Bacillota
GTT
Asn
>WENV170562356
CZCB01002273
341996
Bacillota
CCC
Gly
>WENV170562751
CZCB01005043
258853
Bacillota
CCA
Trp
>WENV170562213
CZCB01001430
258853
Bacillota
CCA
Trp
>WENV170563177
CZCB01011405
257952
Bacillota
TGT
Thr
>WENV170562250
CZCB01001558
257952
Bacillota
TGT
Thr
>WENV170562870
CZCB01006372
236206
Bacillota
CCA
Trp
>WENV170562698
CZCB01004751
236206
Bacillota
CCA
Trp
>WENV170562964
CZCB01008152
338439
Bacillota
GCC
Gly
>WENV170562563
CZCB01003571
338439
Bacillota
GCC
Gly
>WENV170562525
CZCB01003307
338439
Bacillota
GCC
Gly
>WENV170562467
CZCB01002978
338531
Bacillota
GCC
Gly
>WENV170562023
CZCB01000644
338531
Bacillota
GCC
Gly
>WENV170563758
CZCB01028451
340131
Bacillota
GTT
Asn
>WENV170563382
CZCB01016478
153041
Bacillota
GGG
Pro
>WENV170563718
CZCB01026320
235499
Bacillota
GGT
Thr
>WENV170562269
CZCB01001702
255013
Bacillota
GGT
Thr
>WENV170562344
CZCB01002262
236184
Bacillota
GGT
Thr
>WENV170563670
CZCB01024742
413152
Bacillota
TCC
Gly
>WENV170562139
CZCB01001076
348433
Bacillota
TTC
Glu
>WENV170561844
CZCB01000223
348433
Bacillota
TTC
Glu
>WENV170562285
CZCB01001879
242750
Bacillota
TAC
Val
>WENV170562181
CZCB01001319
242750
Bacillota
TAC
Val
>WENV170562544
CZCB01003494
413330
Bacillota
CTG
Gln
>WENV170562419
CZCB01002660
100980
Bacillota
GTA
Tyr
>WENV170562251
CZCB01001596
100980
Bacillota
GTA
Tyr
>WENV170563970
CZCB01039885
126732
Bacillota
GGG
Pro
>WENV170562231
CZCB01001474
241471
Bacillota
TGC
Ala
>WENV170563440
CZCB01018115
350782
Bacillota
GCC
Gly
>WENV170563284
CZCB01013638
145624
Bacillota
ACG
Arg
>WENV170562144
CZCB01001082
145624
Bacillota
ACG
Arg
>WENV170563715
CZCB01026240
235877
Bacillota
TGC
Ala
>WENV170563053
CZCB01009215
235877
Bacillota
TGC
Ala
>WENV170562605
CZCB01003857
245386
Bacillota
CCA
Trp
>WENV170563521
CZCB01020435
258868
Bacillota
TAC
Val
>WENV170562054
CZCB01000734
258997
Bacillota
CTT
Lys
>WENV170563121
CZCB01010374
166673
Bacillota
ACG
Arg
>WENV170562309
CZCB01002037
342061
Bacillota
GCA
Cys
>WENV170564071
CZCB01046089
147674
Bacillota
TCT
Arg
>WENV170562577
CZCB01003685
151040
Bacillota
GTC
Asp
>WENV170563277
CZCB01013441
342833
Bacillota
GTT
Asn
>WENV170563125
CZCB01010438
342833
Bacillota
GTT
Asn
>WENV170563899
CZCB01034859
235638
Bacillota
GAA
Phe
>WENV170564069
CZCB01046010
243234
Bacillota
TGG
Pro
>WENV170564067
CZCB01045941
243234
Bacillota
TGG
Pro
>WENV170563841
CZCB01031539
259290
Bacillota
CAT
Met
>WENV170563836
CZCB01031370
259290
Bacillota
CAT
Met
>WENV170563342
CZCB01015489
259290
Bacillota
CAT
Met
>WENV170562814
CZCB01005584
259290
Bacillota
CAT
Met
>WENV170562599
CZCB01003841
259290
Bacillota
CAT
Met
>WENV170563950
CZCB01038467
241736
Bacillota
TTT
Lys
>WENV170563861
CZCB01032758
241736
Bacillota
TTT
Lys
>WENV170562912
CZCB01007222
241736
Bacillota
TTT
Lys
>WENV170562514
CZCB01003269
241736
Bacillota
TTT
Lys
>WENV170562225
CZCB01001440
241736
Bacillota
TTT
Lys
>WENV170561867
CZCB01000257
241736
Bacillota
TTT
Lys
>WENV170561861
CZCB01000256
241736
Bacillota
TTT
Lys
>WENV170561812
CZCB01000135
241736
Bacillota
TTT
Lys
>WENV170563033
CZCB01009036
157838
Bacillota
GTC
Asp
>WENV170563028
CZCB01008975
235291
Bacillota
TTT
Lys
>WENV170563660
CZCB01024432
353288
Bacillota
TTC
Glu
>WENV170563650
CZCB01024026
353288
Bacillota
TTC
Glu
>WENV170562132
CZCB01001069
353288
Bacillota
TTC
Glu
>WENV170562874
CZCB01006508
341971
Bacillota
GCC
Gly
>WENV170562694
CZCB01004657
341971
Bacillota
GCC
Gly
>WENV170562587
CZCB01003696
341971
Bacillota
GCC
Gly
>WENV170562242
CZCB01001541
341971
Bacillota
GCC
Gly
>WENV170561797
CZCB01000072
341971
Bacillota
GCC
Gly
>WENV170563774
CZCB01028926
254429
Bacillota
GGT
Thr
>WENV170563040
CZCB01009140
242154
Bacillota
CGG
Pro
>WENV170563176
CZCB01011405
353527
Bacillota
TTC
Glu
>WENV170562894
CZCB01006787
353527
Bacillota
TTC
Glu
>WENV170562083
CZCB01000805
353527
Bacillota
TTC
Glu
>WENV170563281
CZCB01013628
58712
Bacillota
CAG
Leu
>WENV170563242
CZCB01012374
238834
Bacillota
TTT
Lys
>WENV170563056
CZCB01009239
238834
Bacillota
TTT
Lys
>WENV170563006
CZCB01008631
238834
Bacillota
TTT
Lys
>WENV170562953
CZCB01007904
238834
Bacillota
TTT
Lys
>WENV170563579
CZCB01021755
415519
Bacillota
GCA
Cys
>WENV170563039
CZCB01009069
242334
Bacillota
GGT
Thr
>WENV170562749
CZCB01005036
242334
Bacillota
GGT
Thr
>WENV170561901
CZCB01000314
357939
Bacillota
GCA
Cys
>WENV170563178
CZCB01011405
100976
Bacillota
GTA
Tyr
>WENV170563138
CZCB01010669
100976
Bacillota
GTA
Tyr
>WENV170562067
CZCB01000792
100976
Bacillota
GTA
Tyr
>WENV170561920
CZCB01000372
100976
Bacillota
GTA
Tyr
>WENV170563554
CZCB01021316
242686
Bacillota
TGC
Ala
>WENV170563052
CZCB01009214
242686
Bacillota
TGC
Ala
>WENV170564090
CZCB01049125
420471
Bacillota
TCC
Gly
>WENV170563976
CZCB01040186
420471
Bacillota
TCC
Gly
>WENV170563160
CZCB01011021
147230
Bacillota
GAT
Ile
>WENV170563476
CZCB01019501
10923
Bacillota
GCT
Ser
>WENV170563995
CZCB01040885
254427
Bacillota
TTC
Glu
>WENV170563220
CZCB01012168
3525
Bacillota
GCT
Ser
>WENV170563107
CZCB01010105
3525
Bacillota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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